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The map label for this gene is 59711941

Identifier: 59711941

GI number: 59711941

Start: 1482124

End: 1482921

Strand: Direct

Name: 59711941

Synonym: VF_1334

Alternate gene names: NA

Gene position: 1482124-1482921 (Clockwise)

Preceding gene: 59711940

Following gene: 59711946

Centisome position: 51.15

GC content: 36.59

Gene sequence:

>798_bases
ATGAAATTCCCTAAAACTCTTCCTGAAACACACAAGGCTCTTCTTTCTACAATTGCTGATTCTTTTTCACAGGACACAAG
AATCGAAGGTATTGGTGTAAGTGGTTCATATGCATCTGACTCTATGGATAAATACAGTGATTTAGACCTTGTCATTGCTA
TTTCACCTACTCATTTTGAAGAAGTGATGTCATCGCGTTTTGAACTAATCAATAAAATAGAAGGAAAAGTCGCAGCTTTC
ACGGGTGAACATGTCGGAGAACCAAGACTTATCATTGCCTTGTTTAAACCTCATGCAATACATGTAGATTTTAAATTCGT
TTCATTGCCTGATGCGGCAGTGCGAGTCGATGATACAAAAGTGATTTGGGATCGAAGTGGATTACTCACTAAAGTGTTTG
ATAACTCTACTCATCAATACCCTCAACCTTCTCCTCAATGGATAGAAGATCGTTTTTGGGTTTGGACTCATTATGCTGCA
ACCAAAATTGCGCGAGGCGAATACTTTGAAACTGTCGAATTTCTATCATTTTTAAGAAGTGTTGTTCTTTCACCATTAGC
TTTGCAACAAAATGGATTAACTCCATCTGGTGTGAGAAAAATAGAGCAACGCTTACCTGAATTTTCTCAACATTTAAAAG
AGACCGTTGTTCCGCCTGAAAAAGACGCATTAATTAATGCACTTCAATGTTGTATTTCGTTATATCTAAAATTAAGAGAA
AACGAAATTGATGTAGATGTACAACTAGAAGCGCAACATCTTGCTCTGCATTATGTAGACCAAGAATTAATGAAATAA

Upstream 100 bases:

>100_bases
ATAAAAAATAAATTTCAGAATACTCTGTAATGCTGCGTTGTTTTTACCGCACTAACTGATCATCAGTTTTAACATCGAAT
TCGATATAAAGGTAAAAAAT

Downstream 100 bases:

>100_bases
AGTGACAAGTTAAAGGGGGATATTTACCCCCTTTTTATTACAACTCACTCTCTAGTTGAGTTAAGTAATCACGCATATAT
TGAGTGCGTTTTTCGGCTTC

Product: oxalate/formate antiporter

Products: NA

Alternate protein names: DNA Polymerase Beta Domain Protein Region; Oxalate/Formate Antiporter; DNA Polymerase Beta Subunit

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKFPKTLPETHKALLSTIADSFSQDTRIEGIGVSGSYASDSMDKYSDLDLVIAISPTHFEEVMSSRFELINKIEGKVAAF
TGEHVGEPRLIIALFKPHAIHVDFKFVSLPDAAVRVDDTKVIWDRSGLLTKVFDNSTHQYPQPSPQWIEDRFWVWTHYAA
TKIARGEYFETVEFLSFLRSVVLSPLALQQNGLTPSGVRKIEQRLPEFSQHLKETVVPPEKDALINALQCCISLYLKLRE
NEIDVDVQLEAQHLALHYVDQELMK

Sequences:

>Translated_265_residues
MKFPKTLPETHKALLSTIADSFSQDTRIEGIGVSGSYASDSMDKYSDLDLVIAISPTHFEEVMSSRFELINKIEGKVAAF
TGEHVGEPRLIIALFKPHAIHVDFKFVSLPDAAVRVDDTKVIWDRSGLLTKVFDNSTHQYPQPSPQWIEDRFWVWTHYAA
TKIARGEYFETVEFLSFLRSVVLSPLALQQNGLTPSGVRKIEQRLPEFSQHLKETVVPPEKDALINALQCCISLYLKLRE
NEIDVDVQLEAQHLALHYVDQELMK
>Mature_265_residues
MKFPKTLPETHKALLSTIADSFSQDTRIEGIGVSGSYASDSMDKYSDLDLVIAISPTHFEEVMSSRFELINKIEGKVAAF
TGEHVGEPRLIIALFKPHAIHVDFKFVSLPDAAVRVDDTKVIWDRSGLLTKVFDNSTHQYPQPSPQWIEDRFWVWTHYAA
TKIARGEYFETVEFLSFLRSVVLSPLALQQNGLTPSGVRKIEQRLPEFSQHLKETVVPPEKDALINALQCCISLYLKLRE
NEIDVDVQLEAQHLALHYVDQELMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30112; Mature: 30112

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPKTLPETHKALLSTIADSFSQDTRIEGIGVSGSYASDSMDKYSDLDLVIAISPTHFE
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCEEEEEECCHHHH
EVMSSRFELINKIEGKVAAFTGEHVGEPRLIIALFKPHAIHVDFKFVSLPDAAVRVDDTK
HHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCEEEEEEEEEEECCCCEEEECCCE
VIWDRSGLLTKVFDNSTHQYPQPSPQWIEDRFWVWTHYAATKIARGEYFETVEFLSFLRS
EEECCCCCEEEHHCCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHH
VVLSPLALQQNGLTPSGVRKIEQRLPEFSQHLKETVVPPEKDALINALQCCISLYLKLRE
HHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
NEIDVDVQLEAQHLALHYVDQELMK
CCCCEEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFPKTLPETHKALLSTIADSFSQDTRIEGIGVSGSYASDSMDKYSDLDLVIAISPTHFE
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCEEEEEECCHHHH
EVMSSRFELINKIEGKVAAFTGEHVGEPRLIIALFKPHAIHVDFKFVSLPDAAVRVDDTK
HHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCEEEEEEEEEEECCCCEEEECCCE
VIWDRSGLLTKVFDNSTHQYPQPSPQWIEDRFWVWTHYAATKIARGEYFETVEFLSFLRS
EEECCCCCEEEHHCCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHH
VVLSPLALQQNGLTPSGVRKIEQRLPEFSQHLKETVVPPEKDALINALQCCISLYLKLRE
HHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
NEIDVDVQLEAQHLALHYVDQELMK
CCCCEEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA