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The map label for this gene is pqiA [H]

Identifier: 59711883

GI number: 59711883

Start: 1418309

End: 1419535

Strand: Reverse

Name: pqiA [H]

Synonym: VF_1276

Alternate gene names: 59711883

Gene position: 1419535-1418309 (Counterclockwise)

Preceding gene: 59711884

Following gene: 59711882

Centisome position: 48.99

GC content: 38.71

Gene sequence:

>1227_bases
GTGGAAGACGCTAAATTTCGTCGCTGTCACGGCTGTGATCTTGTTGTTGAGGTAGCGAAGGTAAAGAAAAAGCAAAACGC
TCATTGCCCTCGCTGCAACACACAGCTTTATCGTGGTAACCGAATTTCATTAAATAGTGATCTTGCTATCGCCATCGCTG
CGCTATTACTATTTATTCCTTCTCATTTTTTCCCAATGGTTACCATCAAACTGTTTGGTGTAATGATCCCAGCAACCTTG
CCTTCAGGCACCATTACCTTAATGGCTGAAGGTTTCCCGATGCTCGGCCTACTTATTTTATTTTGTAGTTCAATTGTCCC
TTTTCTTGTGTGTGGCTCAGTGGTTACCGCTCACCTAGCACTTCGAAAGAAATGGTTCAAAACCTACAGGTTAAGTTTAT
CTATCATTCAACACTTAAAAGACTGGATGATGCTTGATGTCTTTTTAATTAGCTTAGCCATTGCTTGTTTTAAAATTCAA
GATCACGCTGATATATTTATCGGCTCGGGATTATATGGACTTGTTCTTCTTCAATTCACAACGTCTTTATTGTTAACTCA
TGTCAGTGTGCGTCGTTACTGGCGTGTTTGGCAAAGAAAGCATCAGCAGGATACTGAAGCCCCTATTGTCGACCCTAAGC
ATTCTATCCATTGCGAACATTGCCACTTTACTCAACAAAAAGGCAGTCACTGTATTCGTTGTAAACGTCCAATTCACTTT
AGAAAGCCTAAGTCGATTCAAAAAACCTGGGCTTACTTAATTGCTGCAGCTATCTTCATTATTCCTGCTAACATTTTATC
TATCTCAATTTTACTCACCAATGGTAAACGTTTAGAAGATACTATTTTTTCAGGTGTTGCAGGCTTAATCAGAACTGACA
TGTATGGTATTGCGGCTATTATTTTTATCGCTAGTATTATTGTACCAGTTGCTAAAATTCTTGGGCTTGGCTATTTATTG
CTCTGTGTGCAATTTAAACGCTCGGCTTTTCATCGTCAAAGAATGTTCATTTATACTGCGGTTAAATGGATTGGAAAATG
GTCTGTAATGGATTTATTTGTTATCTCTATTATGATGACATTAATAGATCGCGGACAAATTTTAGATTTTACTCCCGGCC
TTGGTGCTGTGGCTTTTGGTTTAGTAGTCGTATTCACCATGCTAGCAGCCGAAAGTTTTGATTCTCGTTTAATTTGGGAT
AATTATGAACCAACCAAAAAATCTTGA

Upstream 100 bases:

>100_bases
AAGTATCTCAATCAGGTACACACCACGAGTTAGTTACACAGCAAGGACTGTATCAAACACTGTATGGCACTATTCAAAGC
TAATTTAATGGATCACAGAA

Downstream 100 bases:

>100_bases
TTCATCGATTGAGCAAGTCAACATCAAAGAAGAGCGTGGCATTTCACCCCTTTGGATCCTACCTTTACTCGCTTTATGTC
TTGGTGGTTGGCTTGTTTAT

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MEDAKFRRCHGCDLVVEVAKVKKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIPSHFFPMVTIKLFGVMIPATL
PSGTITLMAEGFPMLGLLILFCSSIVPFLVCGSVVTAHLALRKKWFKTYRLSLSIIQHLKDWMMLDVFLISLAIACFKIQ
DHADIFIGSGLYGLVLLQFTTSLLLTHVSVRRYWRVWQRKHQQDTEAPIVDPKHSIHCEHCHFTQQKGSHCIRCKRPIHF
RKPKSIQKTWAYLIAAAIFIIPANILSISILLTNGKRLEDTIFSGVAGLIRTDMYGIAAIIFIASIIVPVAKILGLGYLL
LCVQFKRSAFHRQRMFIYTAVKWIGKWSVMDLFVISIMMTLIDRGQILDFTPGLGAVAFGLVVVFTMLAAESFDSRLIWD
NYEPTKKS

Sequences:

>Translated_408_residues
MEDAKFRRCHGCDLVVEVAKVKKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIPSHFFPMVTIKLFGVMIPATL
PSGTITLMAEGFPMLGLLILFCSSIVPFLVCGSVVTAHLALRKKWFKTYRLSLSIIQHLKDWMMLDVFLISLAIACFKIQ
DHADIFIGSGLYGLVLLQFTTSLLLTHVSVRRYWRVWQRKHQQDTEAPIVDPKHSIHCEHCHFTQQKGSHCIRCKRPIHF
RKPKSIQKTWAYLIAAAIFIIPANILSISILLTNGKRLEDTIFSGVAGLIRTDMYGIAAIIFIASIIVPVAKILGLGYLL
LCVQFKRSAFHRQRMFIYTAVKWIGKWSVMDLFVISIMMTLIDRGQILDFTPGLGAVAFGLVVVFTMLAAESFDSRLIWD
NYEPTKKS
>Mature_408_residues
MEDAKFRRCHGCDLVVEVAKVKKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIPSHFFPMVTIKLFGVMIPATL
PSGTITLMAEGFPMLGLLILFCSSIVPFLVCGSVVTAHLALRKKWFKTYRLSLSIIQHLKDWMMLDVFLISLAIACFKIQ
DHADIFIGSGLYGLVLLQFTTSLLLTHVSVRRYWRVWQRKHQQDTEAPIVDPKHSIHCEHCHFTQQKGSHCIRCKRPIHF
RKPKSIQKTWAYLIAAAIFIIPANILSISILLTNGKRLEDTIFSGVAGLIRTDMYGIAAIIFIASIIVPVAKILGLGYLL
LCVQFKRSAFHRQRMFIYTAVKWIGKWSVMDLFVISIMMTLIDRGQILDFTPGLGAVAFGLVVVFTMLAAESFDSRLIWD
NYEPTKKS

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=403, Percent_Identity=37.9652605459057, Blast_Score=272, Evalue=3e-74,
Organism=Escherichia coli, GI1787183, Length=414, Percent_Identity=29.2270531400966, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 46145; Mature: 46145

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDAKFRRCHGCDLVVEVAKVKKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIP
CCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCEECCCCCHHHHHHHHHHHHH
SHFFPMVTIKLFGVMIPATLPSGTITLMAEGFPMLGLLILFCSSIVPFLVCGSVVTAHLA
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKKWFKTYRLSLSIIQHLKDWMMLDVFLISLAIACFKIQDHADIFIGSGLYGLVLLQFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH
TSLLLTHVSVRRYWRVWQRKHQQDTEAPIVDPKHSIHCEHCHFTQQKGSHCIRCKRPIHF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHCCCCEEEECCCCCC
RKPKSIQKTWAYLIAAAIFIIPANILSISILLTNGKRLEDTIFSGVAGLIRTDMYGIAAI
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
IFIASIIVPVAKILGLGYLLLCVQFKRSAFHRQRMFIYTAVKWIGKWSVMDLFVISIMMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LIDRGQILDFTPGLGAVAFGLVVVFTMLAAESFDSRLIWDNYEPTKKS
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
>Mature Secondary Structure
MEDAKFRRCHGCDLVVEVAKVKKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIP
CCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCEECCCCCHHHHHHHHHHHHH
SHFFPMVTIKLFGVMIPATLPSGTITLMAEGFPMLGLLILFCSSIVPFLVCGSVVTAHLA
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKKWFKTYRLSLSIIQHLKDWMMLDVFLISLAIACFKIQDHADIFIGSGLYGLVLLQFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH
TSLLLTHVSVRRYWRVWQRKHQQDTEAPIVDPKHSIHCEHCHFTQQKGSHCIRCKRPIHF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHCCCCEEEECCCCCC
RKPKSIQKTWAYLIAAAIFIIPANILSISILLTNGKRLEDTIFSGVAGLIRTDMYGIAAI
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
IFIASIIVPVAKILGLGYLLLCVQFKRSAFHRQRMFIYTAVKWIGKWSVMDLFVISIMMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LIDRGQILDFTPGLGAVAFGLVVVFTMLAAESFDSRLIWDNYEPTKKS
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]