| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711864
Identifier: 59711864
GI number: 59711864
Start: 1398978
End: 1400972
Strand: Reverse
Name: 59711864
Synonym: VF_1257
Alternate gene names: NA
Gene position: 1400972-1398978 (Counterclockwise)
Preceding gene: 59711866
Following gene: 59711862
Centisome position: 48.35
GC content: 34.19
Gene sequence:
>1995_bases ATGTCGATAATAACGCTGTTTGATTACAAAACAGCACATATATTTATATTAATTAAAATAGAATTATATATTATGAAACA TATCTTAACTGCTTTGCTTGCTTTATCTTTATTTGGGTGTGGTGGTGACAGCTCCTCCGACAATAAAGCCGTAGTTAATC ATGTAACAACGCCAGAAAAAACCGTAAACCTTGATGGCATCAGTTTAAAGTCAACTATTTATCCAGATAAAATAAATGAT TACTCTAACCGAGATCATTTAAAAGTCGTCTTTTCCACAGATAATATTACTGATGGTTCAGAAACCATATCTTGCAATTG GATGATAGATAACATTACTGTTTCAAATGATTGTGAATATCAGTTGAAAGAAAATGAACACCTTTCGCCTATTATTGTAT CTGCTCAACTTAATTATAAAGAACAAGTAACCGAGCCATTCATTAAAACATTTACTAAGGCATTTCCTATTCAACAAGTA GAAAATAGTTATAGTAAAGTGACTCTGCTTAATACCGGTCAAGTTATAGAGTGGAATCATATTCTTGATGGAGAATATGC ATATCAAGCAGAAAGACGCTTTGAAAAAATCCCATCAATAGATAATCATCAGTTTATCGCCATCTATGCACATGCTAATG CCTTCTCTGGTATAAAAAATAATGGCAACTTCTACCTTTGGGGGCCAAAAATAAAAGATAATGTTGATTTAATTGATGCA ATCAACGCTGAAGGAGTTAAAAAAGTCACTTCTGCAAATAACTATTTTTCAATATTAACCAATACAGGCAATGTTTATAT TATTGGTAGTACTAAAGGCACAACTAAAAAGTTAACTATCGATAATGGTATTGATATGTTAACGAGTGAAAGCAGTACTA TTATTCAAACTGAAGAAGACAAAGCTTGCTTAATTGAAGATAGCGGAAAAATATCATGCAGTGATATACAAGGCGATATA AAGAACCTTGTAGAGCTAAAATACGATTATAAAGGTAACTACGCGCTTTTAACCGATCAAGGCAATCTATATCGATGGGG AAAACTAGCAAAAGCACAAGGCGAATTAGTTAGCCAAAATGTAGAGAATATTATTGCAAATGATAGTGCTTTTGCTTTTC TTAGACTAGATGGAACCGTTGGTGCTTGGGGAAGCAGAACCCAAGGTGGTGAATTCATCTATGATTATTATAGTTTTGAG CAAACTTACTTTAAAGCCAGTAAGAAATGCGTACCTGTAAAAAATGATGAACCAGACTATGACTCAAGCGATATATATGA TCCTGACTATGAACCAGCTTATGATCCGATATGTGGCCGAGGCTATGAGCAAGTGTCTATTCCTGCGTATTATTCACCAG AAAAAAAACACTCTGAGCATAAATTAGATACTGAACTGACCAATGTTAAAAAAATCGTTGGTGCGTCTGGTTCTTTTGCG GCCTTAACTCTTGATGGTGATGTTATTACATGGGGAACTATCTTCAGTGGAGGTAATATTTACTCAGATAAAGTTAACCA TGCAAATGAATTAACCAATATCGTAGATATAAAAACAAACACAAGCGGGTATTCAACCATACGACAAGATGGTGATATTA CTTCATGGCAAGGAATATGGGATATTGCAGCCGAGATACAATTTGGTGAATATATTAAATATTATTATTATGACCAAAAT AGACCGAGTCATGTAGGGTTCTCTGATGCATTTATCAAAGCATCTCCAGATAGTGTTACCTCTTTCACATCAAATGAAGG CGCTTATTTATTAACAGAAGAAGCAAAGCGAGAACCCTCTCCCCACTTCATCCTTAACTCGTGGGGATTTAAAGAGCTTG GTGCTAGTTTAACAAATATAAAATTACCTGGAAAAGTCGATAAAGTATTCTCACATAAAACGGGCTTTACTATTTATACT GACCAAGGACATATTTATAACATTGATGTACCCAATGAGATCGCCGTACTTAAAAAAATAGAGACGACGATTTAA
Upstream 100 bases:
>100_bases TTTTACATTCATTAAGTTAAGTGATTTATATCTAGCATTCATTTCACTTATGAAATACTATTCACTAAAAGGCACTTATA AATAATAGCCTTAATGTAGC
Downstream 100 bases:
>100_bases GAGATAAAAAACAAATGCGTGGAGTGGATATGGTCTTTGTATTGACCATATCCATTTTTACAATAACTTTTTTAAAACTG CAGTGAATCACCTTGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 664; Mature: 663
Protein sequence:
>664_residues MSIITLFDYKTAHIFILIKIELYIMKHILTALLALSLFGCGGDSSSDNKAVVNHVTTPEKTVNLDGISLKSTIYPDKIND YSNRDHLKVVFSTDNITDGSETISCNWMIDNITVSNDCEYQLKENEHLSPIIVSAQLNYKEQVTEPFIKTFTKAFPIQQV ENSYSKVTLLNTGQVIEWNHILDGEYAYQAERRFEKIPSIDNHQFIAIYAHANAFSGIKNNGNFYLWGPKIKDNVDLIDA INAEGVKKVTSANNYFSILTNTGNVYIIGSTKGTTKKLTIDNGIDMLTSESSTIIQTEEDKACLIEDSGKISCSDIQGDI KNLVELKYDYKGNYALLTDQGNLYRWGKLAKAQGELVSQNVENIIANDSAFAFLRLDGTVGAWGSRTQGGEFIYDYYSFE QTYFKASKKCVPVKNDEPDYDSSDIYDPDYEPAYDPICGRGYEQVSIPAYYSPEKKHSEHKLDTELTNVKKIVGASGSFA ALTLDGDVITWGTIFSGGNIYSDKVNHANELTNIVDIKTNTSGYSTIRQDGDITSWQGIWDIAAEIQFGEYIKYYYYDQN RPSHVGFSDAFIKASPDSVTSFTSNEGAYLLTEEAKREPSPHFILNSWGFKELGASLTNIKLPGKVDKVFSHKTGFTIYT DQGHIYNIDVPNEIAVLKKIETTI
Sequences:
>Translated_664_residues MSIITLFDYKTAHIFILIKIELYIMKHILTALLALSLFGCGGDSSSDNKAVVNHVTTPEKTVNLDGISLKSTIYPDKIND YSNRDHLKVVFSTDNITDGSETISCNWMIDNITVSNDCEYQLKENEHLSPIIVSAQLNYKEQVTEPFIKTFTKAFPIQQV ENSYSKVTLLNTGQVIEWNHILDGEYAYQAERRFEKIPSIDNHQFIAIYAHANAFSGIKNNGNFYLWGPKIKDNVDLIDA INAEGVKKVTSANNYFSILTNTGNVYIIGSTKGTTKKLTIDNGIDMLTSESSTIIQTEEDKACLIEDSGKISCSDIQGDI KNLVELKYDYKGNYALLTDQGNLYRWGKLAKAQGELVSQNVENIIANDSAFAFLRLDGTVGAWGSRTQGGEFIYDYYSFE QTYFKASKKCVPVKNDEPDYDSSDIYDPDYEPAYDPICGRGYEQVSIPAYYSPEKKHSEHKLDTELTNVKKIVGASGSFA ALTLDGDVITWGTIFSGGNIYSDKVNHANELTNIVDIKTNTSGYSTIRQDGDITSWQGIWDIAAEIQFGEYIKYYYYDQN RPSHVGFSDAFIKASPDSVTSFTSNEGAYLLTEEAKREPSPHFILNSWGFKELGASLTNIKLPGKVDKVFSHKTGFTIYT DQGHIYNIDVPNEIAVLKKIETTI >Mature_663_residues SIITLFDYKTAHIFILIKIELYIMKHILTALLALSLFGCGGDSSSDNKAVVNHVTTPEKTVNLDGISLKSTIYPDKINDY SNRDHLKVVFSTDNITDGSETISCNWMIDNITVSNDCEYQLKENEHLSPIIVSAQLNYKEQVTEPFIKTFTKAFPIQQVE NSYSKVTLLNTGQVIEWNHILDGEYAYQAERRFEKIPSIDNHQFIAIYAHANAFSGIKNNGNFYLWGPKIKDNVDLIDAI NAEGVKKVTSANNYFSILTNTGNVYIIGSTKGTTKKLTIDNGIDMLTSESSTIIQTEEDKACLIEDSGKISCSDIQGDIK NLVELKYDYKGNYALLTDQGNLYRWGKLAKAQGELVSQNVENIIANDSAFAFLRLDGTVGAWGSRTQGGEFIYDYYSFEQ TYFKASKKCVPVKNDEPDYDSSDIYDPDYEPAYDPICGRGYEQVSIPAYYSPEKKHSEHKLDTELTNVKKIVGASGSFAA LTLDGDVITWGTIFSGGNIYSDKVNHANELTNIVDIKTNTSGYSTIRQDGDITSWQGIWDIAAEIQFGEYIKYYYYDQNR PSHVGFSDAFIKASPDSVTSFTSNEGAYLLTEEAKREPSPHFILNSWGFKELGASLTNIKLPGKVDKVFSHKTGFTIYTD QGHIYNIDVPNEIAVLKKIETTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74327; Mature: 74196
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIITLFDYKTAHIFILIKIELYIMKHILTALLALSLFGCGGDSSSDNKAVVNHVTTPEK CEEEEEEECCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC TVNLDGISLKSTIYPDKINDYSNRDHLKVVFSTDNITDGSETISCNWMIDNITVSNDCEY EEECCCEEEECEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCE QLKENEHLSPIIVSAQLNYKEQVTEPFIKTFTKAFPIQQVENSYSKVTLLNTGQVIEWNH EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCEEEEEE ILDGEYAYQAERRFEKIPSIDNHQFIAIYAHANAFSGIKNNGNFYLWGPKIKDNVDLIDA EECCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEC INAEGVKKVTSANNYFSILTNTGNVYIIGSTKGTTKKLTIDNGIDMLTSESSTIIQTEED CCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEECCCCEEEEECCC KACLIEDSGKISCSDIQGDIKNLVELKYDYKGNYALLTDQGNLYRWGKLAKAQGELVSQN CEEEEECCCCEEEHHHHHHHHHHHEEEEECCCCEEEEECCCCEEECCCHHHHHHHHHHHH VENIIANDSAFAFLRLDGTVGAWGSRTQGGEFIYDYYSFEQTYFKASKKCVPVKNDEPDY HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEECCCCCCCCC DSSDIYDPDYEPAYDPICGRGYEQVSIPAYYSPEKKHSEHKLDTELTNVKKIVGASGSFA CCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE ALTLDGDVITWGTIFSGGNIYSDKVNHANELTNIVDIKTNTSGYSTIRQDGDITSWQGIW EEEECCCEEEEEEEECCCCEECCCCCCHHHCCEEEEEEECCCCCHHHHCCCCCCCCCCHH DIAAEIQFGEYIKYYYYDQNRPSHVGFSDAFIKASPDSVTSFTSNEGAYLLTEEAKREPS HHHEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEHHHCCCCC PHFILNSWGFKELGASLTNIKLPGKVDKVFSHKTGFTIYTDQGHIYNIDVPNEIAVLKKI CCEEEECCCHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHH ETTI HHCC >Mature Secondary Structure SIITLFDYKTAHIFILIKIELYIMKHILTALLALSLFGCGGDSSSDNKAVVNHVTTPEK EEEEEEECCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC TVNLDGISLKSTIYPDKINDYSNRDHLKVVFSTDNITDGSETISCNWMIDNITVSNDCEY EEECCCEEEECEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCE QLKENEHLSPIIVSAQLNYKEQVTEPFIKTFTKAFPIQQVENSYSKVTLLNTGQVIEWNH EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCEEEEEE ILDGEYAYQAERRFEKIPSIDNHQFIAIYAHANAFSGIKNNGNFYLWGPKIKDNVDLIDA EECCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEC INAEGVKKVTSANNYFSILTNTGNVYIIGSTKGTTKKLTIDNGIDMLTSESSTIIQTEED CCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEECCCCEEEEECCC KACLIEDSGKISCSDIQGDIKNLVELKYDYKGNYALLTDQGNLYRWGKLAKAQGELVSQN CEEEEECCCCEEEHHHHHHHHHHHEEEEECCCCEEEEECCCCEEECCCHHHHHHHHHHHH VENIIANDSAFAFLRLDGTVGAWGSRTQGGEFIYDYYSFEQTYFKASKKCVPVKNDEPDY HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEECCCCCCCCC DSSDIYDPDYEPAYDPICGRGYEQVSIPAYYSPEKKHSEHKLDTELTNVKKIVGASGSFA CCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE ALTLDGDVITWGTIFSGGNIYSDKVNHANELTNIVDIKTNTSGYSTIRQDGDITSWQGIW EEEECCCEEEEEEEECCCCEECCCCCCHHHCCEEEEEEECCCCCHHHHCCCCCCCCCCHH DIAAEIQFGEYIKYYYYDQNRPSHVGFSDAFIKASPDSVTSFTSNEGAYLLTEEAKREPS HHHEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEHHHCCCCC PHFILNSWGFKELGASLTNIKLPGKVDKVFSHKTGFTIYTDQGHIYNIDVPNEIAVLKKI CCEEEECCCHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHH ETTI HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA