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The map label for this gene is ompT [H]

Identifier: 59711853

GI number: 59711853

Start: 1387074

End: 1387985

Strand: Reverse

Name: ompT [H]

Synonym: VF_1246

Alternate gene names: 59711853

Gene position: 1387985-1387074 (Counterclockwise)

Preceding gene: 59711855

Following gene: 59711852

Centisome position: 47.9

GC content: 34.76

Gene sequence:

>912_bases
ATGAAACAGTTAATTTTCATACTCACTCCCCTAGTTTTAATCTCCGAAGCAATGGCTGAGAGCGATAAAAAAGATATATC
TTTAGGTCTTTCGCTGGGTGTTTTAAACGGAGCATCTAAAGAACTTGTATATGACGACACTGGAAGAAAACTAAGTCAGC
TTGATTGGAGAATCGATAATGTTCCTATCATAAAATTAGAAACGGACTGGAATATTAACCAAAGATGGACTTTAACGGGT
GATTTTTGGTCTATATTAATCGATGATGGTAACGCCCATATGGAAGACCGAGATTGGTTCATTGAAAATCAACATTTTCC
TACTGATATATCTATAAGTCCAAAAACAACCTTGAAAAAAGCTTATCAAGCGAGCTTACATACCACTTATTGGCTGTTCA
TTCAAAACAATTACGAAATAGGCGCTTTAGGAGGATTTCAATATAACCAATTCAAATGGGAGGATTTAGGTGGTACTTAC
TCATATAACAACGGTACTGATGTAGGAACTTTTCCTGATGTTGTAGGCATTGATTATAAGCAAGAATTCGGTATGTTTTA
TGCTGGGCTAACAGGGAAATACAGACTAGATAACTCTGAGTTTAGTTTTTTATTAAAATTAAGCCCTTGGGTTAAAGCCA
AAGATGTTGATAACCACTACCTAAGAAACCTTACTTTCTATGAAAAAAGTAATGAATACTCTGATGCCGTTTCTCTATCG
ATTAACTATAACTATAACTTCGGTCCAAATATGAATCTATACACCGAATATGCTTATACCAGATATTTTGAAGCCAATGC
AGATATGACAAAGGTCAATAACAAAACAAATGATTCCAGTTTTTCCGAAAATGCAGCTGGCCTAGATAATCTATACTCCA
CACTCTCAATAGGATTGAAATATAGCTTCTAA

Upstream 100 bases:

>100_bases
ATTTAAATAGCTAAAACGGCATCCACCTTAATTAGGAACTCTTAAAGCATCATCGAGAAAACCAATTTACATATACAATA
TAGGAGTATCAAACATACTT

Downstream 100 bases:

>100_bases
TTACAAAGTTACTTTTAAAAATAATGAATAAAACAGCAAATCACAGATACAAAAAAGCCCACACTAGGTGGGCTTCTTCG
TTTAAATAATGGTGCGTCCG

Product: outer membrane protease

Products: NA

Alternate protein names: E protein [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKQLIFILTPLVLISEAMAESDKKDISLGLSLGVLNGASKELVYDDTGRKLSQLDWRIDNVPIIKLETDWNINQRWTLTG
DFWSILIDDGNAHMEDRDWFIENQHFPTDISISPKTTLKKAYQASLHTTYWLFIQNNYEIGALGGFQYNQFKWEDLGGTY
SYNNGTDVGTFPDVVGIDYKQEFGMFYAGLTGKYRLDNSEFSFLLKLSPWVKAKDVDNHYLRNLTFYEKSNEYSDAVSLS
INYNYNFGPNMNLYTEYAYTRYFEANADMTKVNNKTNDSSFSENAAGLDNLYSTLSIGLKYSF

Sequences:

>Translated_303_residues
MKQLIFILTPLVLISEAMAESDKKDISLGLSLGVLNGASKELVYDDTGRKLSQLDWRIDNVPIIKLETDWNINQRWTLTG
DFWSILIDDGNAHMEDRDWFIENQHFPTDISISPKTTLKKAYQASLHTTYWLFIQNNYEIGALGGFQYNQFKWEDLGGTY
SYNNGTDVGTFPDVVGIDYKQEFGMFYAGLTGKYRLDNSEFSFLLKLSPWVKAKDVDNHYLRNLTFYEKSNEYSDAVSLS
INYNYNFGPNMNLYTEYAYTRYFEANADMTKVNNKTNDSSFSENAAGLDNLYSTLSIGLKYSF
>Mature_303_residues
MKQLIFILTPLVLISEAMAESDKKDISLGLSLGVLNGASKELVYDDTGRKLSQLDWRIDNVPIIKLETDWNINQRWTLTG
DFWSILIDDGNAHMEDRDWFIENQHFPTDISISPKTTLKKAYQASLHTTYWLFIQNNYEIGALGGFQYNQFKWEDLGGTY
SYNNGTDVGTFPDVVGIDYKQEFGMFYAGLTGKYRLDNSEFSFLLKLSPWVKAKDVDNHYLRNLTFYEKSNEYSDAVSLS
INYNYNFGPNMNLYTEYAYTRYFEANADMTKVNNKTNDSSFSENAAGLDNLYSTLSIGLKYSF

Specific function: Protease that can cleave T7 RNA polymerase. Specific for paired basic residues [H]

COG id: COG4571

COG function: function code M; Outer membrane protease

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A26 family [H]

Homologues:

Organism=Escherichia coli, GI1786777, Length=312, Percent_Identity=33.6538461538462, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020080
- InterPro:   IPR000036
- InterPro:   IPR020079 [H]

Pfam domain/function: PF01278 Omptin [H]

EC number: 3.4.23.- [C]

Molecular weight: Translated: 34867; Mature: 34867

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLIFILTPLVLISEAMAESDKKDISLGLSLGVLNGASKELVYDDTGRKLSQLDWRIDN
CCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHCEEECC
VPIIKLETDWNINQRWTLTGDFWSILIDDGNAHMEDRDWFIENQHFPTDISISPKTTLKK
EEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEECCCCCCCEEECCHHHHHH
AYQASLHTTYWLFIQNNYEIGALGGFQYNQFKWEDLGGTYSYNNGTDVGTFPDVVGIDYK
HHHHCCCEEEEEEEECCEEEEEEECCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCH
QEFGMFYAGLTGKYRLDNSEFSFLLKLSPWVKAKDVDNHYLRNLTFYEKSNEYSDAVSLS
HHCCEEEECCCCEEEECCCCEEEEEEECCCEEECCCCCHHHHEEEEEECCCCCCCEEEEE
INYNYNFGPNMNLYTEYAYTRYFEANADMTKVNNKTNDSSFSENAAGLDNLYSTLSIGLK
EEEEECCCCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHEEEEE
YSF
ECC
>Mature Secondary Structure
MKQLIFILTPLVLISEAMAESDKKDISLGLSLGVLNGASKELVYDDTGRKLSQLDWRIDN
CCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHCEEECC
VPIIKLETDWNINQRWTLTGDFWSILIDDGNAHMEDRDWFIENQHFPTDISISPKTTLKK
EEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEECCCCCCCEEECCHHHHHH
AYQASLHTTYWLFIQNNYEIGALGGFQYNQFKWEDLGGTYSYNNGTDVGTFPDVVGIDYK
HHHHCCCEEEEEEEECCEEEEEEECCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCH
QEFGMFYAGLTGKYRLDNSEFSFLLKLSPWVKAKDVDNHYLRNLTFYEKSNEYSDAVSLS
HHCCEEEECCCCEEEECCCCEEEEEEECCCEEECCCCCHHHHEEEEEECCCCCCCEEEEE
INYNYNFGPNMNLYTEYAYTRYFEANADMTKVNNKTNDSSFSENAAGLDNLYSTLSIGLK
EEEEECCCCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHEEEEE
YSF
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3023201; 10869088; 11677609; 2651422 [H]