| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is 59711797
Identifier: 59711797
GI number: 59711797
Start: 1322059
End: 1323312
Strand: Direct
Name: 59711797
Synonym: VF_1190
Alternate gene names: NA
Gene position: 1322059-1323312 (Clockwise)
Preceding gene: 59711796
Following gene: 59711798
Centisome position: 45.63
GC content: 39.15
Gene sequence:
>1254_bases ATGAATCACGTCAAATTTGCTCGAAATTTAATTACCGCATCTTTATTTGTTATTCCTTCTATTTCACAAGCAACGACTCA ATCGGAAGTGGTAGAGCACTATGCTGATATCGCTCATGCTGTTTATAGCGACTCTTTATCTACAGCTCAAAAACTGGACA AAGCCATTACTACTTTTTTGAATAATCCTTCTAAAGATGGTTTAGAGACAGTAAAGCTTGCTTGGAAAGAGGCTCGTGTA CCTTATCAACAATCGGAAGTTTTCCGTTTTGGTAATGCGATTGTTGATGAATGGGAAGGGCAATTAAATGCTTGGCCTTT AGATGAAGGCCTAATTGATTATGTTGCAGACGATTATCAATATGAATTAGGTAATGATGGCGCTAAAGCGAATATTGTTG CGTCTAAGTCAATAAAGATTGGTGCTGAAACGATTGATGTAACATCAATTAAGGCAGAGCAATTAGCAGACTTAAATGAG TTAGGCGGTTCTGAGGCAAATGTAGCAACGGGTTATCATGCCATTGAATTTTTACTTTGGGGCCAAGACCTAAATGGAAC TAACTCTGGTGCCGGTGAGCGTCCATACACTGATTATGTTATCGGTTCTGCGTGTACTAACGGTAACTGTGAGCGCCGAG CTGAATATTTAAAAGCGGCTTCTGAATTGTTGATTAAAGATCTTTCTTGGATGGAAAAACAATGGAAAGAAGGTGAGAAA AATTATCGTGCTGAGCTTTTATCTGAATCATCAGAGCAAGGTTTACGTAAGATGCTATTTGGCATGGGGTCATTATCTCT AGGTGAGTTAGCAGGCGAGCGAATGAAGGTTGCATTAGAAGCAAACTCAACAGAGGACGAGCACGATTGTTTTTCTGATA ATACACATAACTCTCATTACTACAACGAACAAGGTATCTATAACGTCTACACGGGGACTTATACACGAGCTGACGGTTCT CAATTGTCTGGACCAAGTATTCATGATCTCGTTGCAAAGAAAGATGCAAAAGCAGCAAAAGAGATTAAACAGCAGTTTGA TGCAACTCGTACTCAAGTAGGTACATTGGTTTCTGCTGCGGAGAAGGATAATCAACACTTTGATCAATTGATTGCTGCTG ATAACGCTGTTGGTAATGCATTAGTAAACAAATCAATTATGTCGTTAGTTTTGCAAACCGCTTCTATTGAACGAGCTGCA AACGTTATTGGCATTACGAGTTTAAATCCTGATACAGCAGATCACGAATTTTAA
Upstream 100 bases:
>100_bases GAGTATATTACGCAAATAAAAATTATTATCATTAATGAATTCTTACAGTTTTCAATTAATGGTTTACAAGTCATATTCAT TTGCTCAACAAGGACGATTC
Downstream 100 bases:
>100_bases TTCTAAGAAAAAGCAGTAATACAATGATATCAACCTAGAAATAGGTGTTAGCTCAATCACATTTCCCCCGATTTAGTGAT TGAGCTCTTTTCTTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNHVKFARNLITASLFVIPSISQATTQSEVVEHYADIAHAVYSDSLSTAQKLDKAITTFLNNPSKDGLETVKLAWKEARV PYQQSEVFRFGNAIVDEWEGQLNAWPLDEGLIDYVADDYQYELGNDGAKANIVASKSIKIGAETIDVTSIKAEQLADLNE LGGSEANVATGYHAIEFLLWGQDLNGTNSGAGERPYTDYVIGSACTNGNCERRAEYLKAASELLIKDLSWMEKQWKEGEK NYRAELLSESSEQGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHYYNEQGIYNVYTGTYTRADGS QLSGPSIHDLVAKKDAKAAKEIKQQFDATRTQVGTLVSAAEKDNQHFDQLIAADNAVGNALVNKSIMSLVLQTASIERAA NVIGITSLNPDTADHEF
Sequences:
>Translated_417_residues MNHVKFARNLITASLFVIPSISQATTQSEVVEHYADIAHAVYSDSLSTAQKLDKAITTFLNNPSKDGLETVKLAWKEARV PYQQSEVFRFGNAIVDEWEGQLNAWPLDEGLIDYVADDYQYELGNDGAKANIVASKSIKIGAETIDVTSIKAEQLADLNE LGGSEANVATGYHAIEFLLWGQDLNGTNSGAGERPYTDYVIGSACTNGNCERRAEYLKAASELLIKDLSWMEKQWKEGEK NYRAELLSESSEQGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHYYNEQGIYNVYTGTYTRADGS QLSGPSIHDLVAKKDAKAAKEIKQQFDATRTQVGTLVSAAEKDNQHFDQLIAADNAVGNALVNKSIMSLVLQTASIERAA NVIGITSLNPDTADHEF >Mature_417_residues MNHVKFARNLITASLFVIPSISQATTQSEVVEHYADIAHAVYSDSLSTAQKLDKAITTFLNNPSKDGLETVKLAWKEARV PYQQSEVFRFGNAIVDEWEGQLNAWPLDEGLIDYVADDYQYELGNDGAKANIVASKSIKIGAETIDVTSIKAEQLADLNE LGGSEANVATGYHAIEFLLWGQDLNGTNSGAGERPYTDYVIGSACTNGNCERRAEYLKAASELLIKDLSWMEKQWKEGEK NYRAELLSESSEQGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHYYNEQGIYNVYTGTYTRADGS QLSGPSIHDLVAKKDAKAAKEIKQQFDATRTQVGTLVSAAEKDNQHFDQLIAADNAVGNALVNKSIMSLVLQTASIERAA NVIGITSLNPDTADHEF
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45727; Mature: 45727
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHVKFARNLITASLFVIPSISQATTQSEVVEHYADIAHAVYSDSLSTAQKLDKAITTFL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNPSKDGLETVKLAWKEARVPYQQSEVFRFGNAIVDEWEGQLNAWPLDEGLIDYVADDYQ CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCE YELGNDGAKANIVASKSIKIGAETIDVTSIKAEQLADLNELGGSEANVATGYHAIEFLLW EECCCCCCCEEEEEECCEEECCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHEEE GQDLNGTNSGAGERPYTDYVIGSACTNGNCERRAEYLKAASELLIKDLSWMEKQWKEGEK CCCCCCCCCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH NYRAELLSESSEQGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHY HHHHHHHHCHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCCC YNEQGIYNVYTGTYTRADGSQLSGPSIHDLVAKKDAKAAKEIKQQFDATRTQVGTLVSAA CCCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKDNQHFDQLIAADNAVGNALVNKSIMSLVLQTASIERAANVIGITSLNPDTADHEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCC >Mature Secondary Structure MNHVKFARNLITASLFVIPSISQATTQSEVVEHYADIAHAVYSDSLSTAQKLDKAITTFL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNPSKDGLETVKLAWKEARVPYQQSEVFRFGNAIVDEWEGQLNAWPLDEGLIDYVADDYQ CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCE YELGNDGAKANIVASKSIKIGAETIDVTSIKAEQLADLNELGGSEANVATGYHAIEFLLW EECCCCCCCEEEEEECCEEECCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHEEE GQDLNGTNSGAGERPYTDYVIGSACTNGNCERRAEYLKAASELLIKDLSWMEKQWKEGEK CCCCCCCCCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH NYRAELLSESSEQGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHY HHHHHHHHCHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCCC YNEQGIYNVYTGTYTRADGSQLSGPSIHDLVAKKDAKAAKEIKQQFDATRTQVGTLVSAA CCCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKDNQHFDQLIAADNAVGNALVNKSIMSLVLQTASIERAANVIGITSLNPDTADHEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA