Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59711792

Identifier: 59711792

GI number: 59711792

Start: 1317577

End: 1317963

Strand: Direct

Name: 59711792

Synonym: VF_1185

Alternate gene names: NA

Gene position: 1317577-1317963 (Clockwise)

Preceding gene: 59711791

Following gene: 59711794

Centisome position: 45.47

GC content: 36.69

Gene sequence:

>387_bases
ATGAGCCAATTAGATCAACAAGCAATAGACAAAATCCAAAACTACAATGAAGAAGAGCGTTTTAATTACTTCATGAAAGA
AGTAGTAGCAAATCGTCAAATTTGGATTTTAACCGATGAGCATGGTTGTGTAATGTTGAACACAGAAGAGGAAGATTGTG
TTCCTGTATGGCCAAATCAAGAGTTTGCAGAAGCATGGTCAACGGGTGAGTGGGACGAGTGTAAAGCTGAATCTATCTCA
TTAAATAAATGGCATAGTCGTTGGACTAACGGTTTAGAAGACGATGAATTAGCTGTGGTTGTATTCCCAAATCAAAATGA
AGAAGGGCAAGTTCTTTTCCCTGACGAGTTTGATTTTGAATTAACAAAACAAGAAAGAAAACGTTAA

Upstream 100 bases:

>100_bases
AAAGCTCATATTAGAATATCTAGTATGGGCTTTTTTTGTGGTATTCTATCGCCATCAATCTGGATAAGACGAACGCAGTT
CACATATTAGGAACCGTAAA

Downstream 100 bases:

>100_bases
TTATTAGAAATTAAAGGCGATACGGCTTATGCAATATCGCCTTTAATTTATTGTTAAGCGTTTAATGCGTCTTGATAGCG
GTGTAACCCTTCTTCAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSQLDQQAIDKIQNYNEEERFNYFMKEVVANRQIWILTDEHGCVMLNTEEEDCVPVWPNQEFAEAWSTGEWDECKAESIS
LNKWHSRWTNGLEDDELAVVVFPNQNEEGQVLFPDEFDFELTKQERKR

Sequences:

>Translated_128_residues
MSQLDQQAIDKIQNYNEEERFNYFMKEVVANRQIWILTDEHGCVMLNTEEEDCVPVWPNQEFAEAWSTGEWDECKAESIS
LNKWHSRWTNGLEDDELAVVVFPNQNEEGQVLFPDEFDFELTKQERKR
>Mature_127_residues
SQLDQQAIDKIQNYNEEERFNYFMKEVVANRQIWILTDEHGCVMLNTEEEDCVPVWPNQEFAEAWSTGEWDECKAESISL
NKWHSRWTNGLEDDELAVVVFPNQNEEGQVLFPDEFDFELTKQERKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15279; Mature: 15148

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLDQQAIDKIQNYNEEERFNYFMKEVVANRQIWILTDEHGCVMLNTEEEDCVPVWPNQ
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCEECCCCH
EFAEAWSTGEWDECKAESISLNKWHSRWTNGLEDDELAVVVFPNQNEEGQVLFPDEFDFE
HHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCCCCCCE
LTKQERKR
ECHHHCCC
>Mature Secondary Structure 
SQLDQQAIDKIQNYNEEERFNYFMKEVVANRQIWILTDEHGCVMLNTEEEDCVPVWPNQ
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCEECCCCH
EFAEAWSTGEWDECKAESISLNKWHSRWTNGLEDDELAVVVFPNQNEEGQVLFPDEFDFE
HHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCCCCCCE
LTKQERKR
ECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA