| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711719
Identifier: 59711719
GI number: 59711719
Start: 1224608
End: 1225591
Strand: Reverse
Name: 59711719
Synonym: VF_1112
Alternate gene names: NA
Gene position: 1225591-1224608 (Counterclockwise)
Preceding gene: 59711720
Following gene: 59711717
Centisome position: 42.3
GC content: 39.53
Gene sequence:
>984_bases ATGAATAAGAAAAATATCTGTGCCCTAGCAGTCTTATCTGGCTTATCCTTTTCAGCGATGGCTTTAGATTGTGACCCAAA TCTACTACCTTCATGGCAAGATGGAGCAAGTAAAACAGCAATCGTCAACTACGTTGATCAATCTACGGATGCTTCAAAAA AAACCTTTATTCCTGAACAAGACCGCATTGCTGTCTTCGATAATGATGGAACATTATGGTCAGAAAAACCTTACTATTTT CAGCTAGCATTTGCGCTGGACCAAGTAAAGAACATGGCAAAAGAGCATCCTGAATGGAAAACACAAGAACCATTTAAATC TGTTCTAAATAATGACATCAAAAACGTGTTTGCTGGTGGTGAAAAAGCCCTACTCGACATAGTTACAGCAACTCACAGTG GCATGACCGTTGAAGAATACCAACAAACTGTCGCACAATGGTTAGAAGTAGCAAAAGACCCACATTTTAATAAAGCCTAT ACTGAGCTTACTTACAAACCAATGCGTGAAATGGTCACTTACCTACAAGATCATGACTTTAAAGTTTATATCGTTTCTGG CGGTGGCGTTGATTTCATGCGTACATGGGCACCAGAAGTGTATGGTATTCCTGAAGAGCAAATCATTGGTAGCGCATTAA AATACAAATACGATTACAACAACAGCAATCCAACGGTCACTAAACTAGGTGAAATCCTGACCATTGATGACAAAGCAGGT AAGGTTGAAAATATTCAACACATCATTGGTAAGAAACCAGTATTAGCCATTGGTAACTCAGATGGTGACCATGCAATGAT GCAATGGGCAACTAGCCAGCCAAATTCAATGGCGATGATCGTTCATCACACAGACGAAGCTCGTGAATGGAAATACGATC GTAAATCAAGTGTTGGCCATTTAGATAAAGCGATGGATGAAGCTAACCAGCGTGATAACTGGTACTTAATCGATATGAAA AATGAGTGGTGTACTGTTTACTAA
Upstream 100 bases:
>100_bases CAATATAAGCTGTTATACCACTTATAACCTTTTTTCATGACATTTATTGCTAGACTTTATAAATGTATTCAAACGATACA AACATTAGGTGAATAATAAT
Downstream 100 bases:
>100_bases CGCTTTCACATTTCAATAATAAAGTCCAAGTGTTAACGCACTTGGATTTTATCGTTCCATCACGCTAATAATTCGCTCTA CTAGAATCGTTAATGCTCTA
Product: nonspecific acid phosphatase precursor
Products: NA
Alternate protein names: NapD-Like Protein; Acid Phosphatase; Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Nonspecific Acid Phosphatase NapD-Like Protein; Nonspecific Acid Phosphatase NapD-Like; Nonspecific Acid Phosphataser; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Nonspecific Acid Phosphatase NapD-Like Protein; Exported Acid Phosphatase; Non-Specific Acid Phosphatase
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNKKNICALAVLSGLSFSAMALDCDPNLLPSWQDGASKTAIVNYVDQSTDASKKTFIPEQDRIAVFDNDGTLWSEKPYYF QLAFALDQVKNMAKEHPEWKTQEPFKSVLNNDIKNVFAGGEKALLDIVTATHSGMTVEEYQQTVAQWLEVAKDPHFNKAY TELTYKPMREMVTYLQDHDFKVYIVSGGGVDFMRTWAPEVYGIPEEQIIGSALKYKYDYNNSNPTVTKLGEILTIDDKAG KVENIQHIIGKKPVLAIGNSDGDHAMMQWATSQPNSMAMIVHHTDEAREWKYDRKSSVGHLDKAMDEANQRDNWYLIDMK NEWCTVY
Sequences:
>Translated_327_residues MNKKNICALAVLSGLSFSAMALDCDPNLLPSWQDGASKTAIVNYVDQSTDASKKTFIPEQDRIAVFDNDGTLWSEKPYYF QLAFALDQVKNMAKEHPEWKTQEPFKSVLNNDIKNVFAGGEKALLDIVTATHSGMTVEEYQQTVAQWLEVAKDPHFNKAY TELTYKPMREMVTYLQDHDFKVYIVSGGGVDFMRTWAPEVYGIPEEQIIGSALKYKYDYNNSNPTVTKLGEILTIDDKAG KVENIQHIIGKKPVLAIGNSDGDHAMMQWATSQPNSMAMIVHHTDEAREWKYDRKSSVGHLDKAMDEANQRDNWYLIDMK NEWCTVY >Mature_327_residues MNKKNICALAVLSGLSFSAMALDCDPNLLPSWQDGASKTAIVNYVDQSTDASKKTFIPEQDRIAVFDNDGTLWSEKPYYF QLAFALDQVKNMAKEHPEWKTQEPFKSVLNNDIKNVFAGGEKALLDIVTATHSGMTVEEYQQTVAQWLEVAKDPHFNKAY TELTYKPMREMVTYLQDHDFKVYIVSGGGVDFMRTWAPEVYGIPEEQIIGSALKYKYDYNNSNPTVTKLGEILTIDDKAG KVENIQHIIGKKPVLAIGNSDGDHAMMQWATSQPNSMAMIVHHTDEAREWKYDRKSSVGHLDKAMDEANQRDNWYLIDMK NEWCTVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37159; Mature: 37159
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKNICALAVLSGLSFSAMALDCDPNLLPSWQDGASKTAIVNYVDQSTDASKKTFIPEQ CCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC DRIAVFDNDGTLWSEKPYYFQLAFALDQVKNMAKEHPEWKTQEPFKSVLNNDIKNVFAGG CCEEEECCCCCEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC EKALLDIVTATHSGMTVEEYQQTVAQWLEVAKDPHFNKAYTELTYKPMREMVTYLQDHDF CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCE KVYIVSGGGVDFMRTWAPEVYGIPEEQIIGSALKYKYDYNNSNPTVTKLGEILTIDDKAG EEEEEECCCCHHHHHCCCHHCCCCHHHHHHHHHEEEEECCCCCCCCEECCCEEEECCCCC KVENIQHIIGKKPVLAIGNSDGDHAMMQWATSQPNSMAMIVHHTDEAREWKYDRKSSVGH CHHHHHHHHCCCCEEEECCCCCCHHHHEECCCCCCCEEEEEEECCCHHHCCCCCCCCHHH LDKAMDEANQRDNWYLIDMKNEWCTVY HHHHHHHHCCCCCEEEEEECCCEEECC >Mature Secondary Structure MNKKNICALAVLSGLSFSAMALDCDPNLLPSWQDGASKTAIVNYVDQSTDASKKTFIPEQ CCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC DRIAVFDNDGTLWSEKPYYFQLAFALDQVKNMAKEHPEWKTQEPFKSVLNNDIKNVFAGG CCEEEECCCCCEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC EKALLDIVTATHSGMTVEEYQQTVAQWLEVAKDPHFNKAYTELTYKPMREMVTYLQDHDF CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCE KVYIVSGGGVDFMRTWAPEVYGIPEEQIIGSALKYKYDYNNSNPTVTKLGEILTIDDKAG EEEEEECCCCHHHHHCCCHHCCCCHHHHHHHHHEEEEECCCCCCCCEECCCEEEECCCCC KVENIQHIIGKKPVLAIGNSDGDHAMMQWATSQPNSMAMIVHHTDEAREWKYDRKSSVGH CHHHHHHHHCCCCEEEECCCCCCHHHHEECCCCCCCEEEEEEECCCHHHCCCCCCCCHHH LDKAMDEANQRDNWYLIDMKNEWCTVY HHHHHHHHCCCCCEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA