| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yfcG [H]
Identifier: 59711689
GI number: 59711689
Start: 1192687
End: 1193379
Strand: Direct
Name: yfcG [H]
Synonym: VF_1082
Alternate gene names: 59711689
Gene position: 1192687-1193379 (Clockwise)
Preceding gene: 59711687
Following gene: 59711690
Centisome position: 41.16
GC content: 40.12
Gene sequence:
>693_bases ATGCTTAAGTTTTATTTTCATCAAACACCTAACCCAATGAAAATTGCATTATATTTAGCTGAAACTGAATTGCCGTTTGA GTTAATGCCCGTAGATACATTAAAAGGTGAGCAGCATACAAAGGAATACCGAGCGATTAATCCAAATGGGAAAGCACCTG CAATTGTTGATGATGGAGTTCGTGTTTTTGATTCAAGTGCGATTTTACTTTACCTATCAGAAACGAGAGGAAAGCTTGGT GGCAAAGCAGAAGACCGCGCCGAGATGCTTTCATGGCTATTATTTATCGCTTCGGGTCTAGGTCCATTTTCCGGTCAGTC GGTACATTTCCGTCATTTTGCACCTGAAAAATTACCCTATGCAATCAACCGCTATTTATCTGAAGCACAGCGTCACTATG ACGTTTTGGATAAACACCTTGAAGGTCGTGAATATATTGTCGGTGATGAGTTTAGCATTGCGGATATTTCGGCATGGGGT TGGATTGATAAAGCGACAGTTGTGTTAGGTGAAGAGGGATTAGCTTCTTACCCAAATATTCAACGTTGGTTTGATGGTAT CAATAGTCGTCCTGCTGTTGAAAAAGCACGGAATATAGCAAACAACGTTGAGTTTAAATCAGAGTTTGATGAAGAGGCTA ATCGTTCTCTTTATCCGCAAAATTTTGCCAAAAGCGGAAGTGCTAAACACTAA
Upstream 100 bases:
>100_bases TATCTTGAACGATCGTTCAAGTCTAGTTATATTGTTTTTAGCCCAACGAATACCAGTCGGTTGTAATGCTGGTTTATTTT GTCATTAGAAGGATATCAAT
Downstream 100 bases:
>100_bases TATTATTTTTATAAAAATAGTTATATCGTTTTTTAGGAGTCAGTATGGAACAACAATATATCCCACCTAAAGTGTGGTCC TTTGATAGTGAAAGCGGTGG
Product: glutathione S-transferase
Products: HX; R-S-glutathione
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLKFYFHQTPNPMKIALYLAETELPFELMPVDTLKGEQHTKEYRAINPNGKAPAIVDDGVRVFDSSAILLYLSETRGKLG GKAEDRAEMLSWLLFIASGLGPFSGQSVHFRHFAPEKLPYAINRYLSEAQRHYDVLDKHLEGREYIVGDEFSIADISAWG WIDKATVVLGEEGLASYPNIQRWFDGINSRPAVEKARNIANNVEFKSEFDEEANRSLYPQNFAKSGSAKH
Sequences:
>Translated_230_residues MLKFYFHQTPNPMKIALYLAETELPFELMPVDTLKGEQHTKEYRAINPNGKAPAIVDDGVRVFDSSAILLYLSETRGKLG GKAEDRAEMLSWLLFIASGLGPFSGQSVHFRHFAPEKLPYAINRYLSEAQRHYDVLDKHLEGREYIVGDEFSIADISAWG WIDKATVVLGEEGLASYPNIQRWFDGINSRPAVEKARNIANNVEFKSEFDEEANRSLYPQNFAKSGSAKH >Mature_230_residues MLKFYFHQTPNPMKIALYLAETELPFELMPVDTLKGEQHTKEYRAINPNGKAPAIVDDGVRVFDSSAILLYLSETRGKLG GKAEDRAEMLSWLLFIASGLGPFSGQSVHFRHFAPEKLPYAINRYLSEAQRHYDVLDKHLEGREYIVGDEFSIADISAWG WIDKATVVLGEEGLASYPNIQRWFDGINSRPAVEKARNIANNVEFKSEFDEEANRSLYPQNFAKSGSAKH
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=204, Percent_Identity=45.5882352941176, Blast_Score=165, Evalue=2e-42, Organism=Escherichia coli, GI87082195, Length=217, Percent_Identity=37.7880184331797, Blast_Score=129, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324100, Length=238, Percent_Identity=27.7310924369748, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571670, Length=195, Percent_Identity=28.7179487179487, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI20130115, Length=192, Percent_Identity=28.6458333333333, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45553325, Length=191, Percent_Identity=31.413612565445, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355859, Length=191, Percent_Identity=31.413612565445, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24645375, Length=191, Percent_Identity=31.413612565445, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922160, Length=200, Percent_Identity=27, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI21686985, Length=200, Percent_Identity=26.5, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI21355857, Length=175, Percent_Identity=29.7142857142857, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17864594, Length=153, Percent_Identity=28.7581699346405, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 26029; Mature: 26029
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFYFHQTPNPMKIALYLAETELPFELMPVDTLKGEQHTKEYRAINPNGKAPAIVDDGV CEEEEEECCCCCEEEEEEEECCCCCEEEECCHHHCCCHHHHHHEEECCCCCCCEEECCCC RVFDSSAILLYLSETRGKLGGKAEDRAEMLSWLLFIASGLGPFSGQSVHFRHFAPEKLPY EEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHH AINRYLSEAQRHYDVLDKHLEGREYIVGDEFSIADISAWGWIDKATVVLGEEGLASYPNI HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHCCCCCCEEEEECCCCCCCCCCH QRWFDGINSRPAVEKARNIANNVEFKSEFDEEANRSLYPQNFAKSGSAKH HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHCCCCCCC >Mature Secondary Structure MLKFYFHQTPNPMKIALYLAETELPFELMPVDTLKGEQHTKEYRAINPNGKAPAIVDDGV CEEEEEECCCCCEEEEEEEECCCCCEEEECCHHHCCCHHHHHHEEECCCCCCCEEECCCC RVFDSSAILLYLSETRGKLGGKAEDRAEMLSWLLFIASGLGPFSGQSVHFRHFAPEKLPY EEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHH AINRYLSEAQRHYDVLDKHLEGREYIVGDEFSIADISAWGWIDKATVVLGEEGLASYPNI HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHCCCCCCEEEEECCCCCCCCCCH QRWFDGINSRPAVEKARNIANNVEFKSEFDEEANRSLYPQNFAKSGSAKH HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]