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The map label for this gene is yhhW [C]

Identifier: 59711675

GI number: 59711675

Start: 1180860

End: 1181726

Strand: Direct

Name: yhhW [C]

Synonym: VF_1068

Alternate gene names: 59711675

Gene position: 1180860-1181726 (Clockwise)

Preceding gene: 59711674

Following gene: 59711679

Centisome position: 40.75

GC content: 39.68

Gene sequence:

>867_bases
ATGTCCGAAGTAATGCAAAAAAACAGAACAGTTGTACAAACCATTTCTGGAGTCGAAACATCAGATGGTGATGGTGTAAA
ACTCACTCGTATTATTGGTACACAAAAGCTAGATGTGCTTGATCCTTTTTTATTGCTGGATTGTTTTGAAAGTGATGATG
CTTCAGATTATATAGGTGGTTTTCCAACGCACCCGCACCGAGGATTTGAAACTGTCAGTTATCTACTAAATGGCAAAATG
CGCCATAAAGACAGTGCTGGGCATGAAGGTGTTGTTGAATCCGGTGGCGTGCAATGGATGACCGCAGGAAAAGGTGTATT
GCATTCCGAAATGCCTGAGCAGGAAGAGGGATTACTGAAAGGATTTCAATTGTGGGTTAATTTACCAAAAGCATCAAAAA
TGATTGAGCCTGCTTATCAAGAGTATCCACCAGAAACGACACCTTTAGAAAAGCGAGAAAATGGTATTGAGATCCGAGTT
ATCGCAGGTTCAACAAATCTAGGTACAAAAGGACCAGTGAATAATGTTCATGTTTATCCTACGTATATGGATATCAATAT
ACCTAGAGGACAAATGTTAGAACAAAGCTTACCGTTTGAGCACAATGCTTTTATCTATGTTATTGAAGGTAATGTGGGTA
TTAAGAGTGATGATAATCAAGTTCAAACTGTTGATATGCGGTCACTCGCAGTATTTGGTAAGGGGCAGAACGTTTCCTTT
GTTGCTGATGACTCTTCAGCCCGATTTTTACTTGTTGCTGGTAAACCATTAAATGAACCGATTGCTCGAGGTGGTCCGTT
TGTAATGAATACTCGTGCAGAAGTATTACAAGCATTTGATGACTTTAACCAAGGTCGATTCCACTAA

Upstream 100 bases:

>100_bases
AAATATCGCCTTAGCAGGTGGTTTTTTAGTGATATTTGCACAAGGTGCGGGCTCGTATGCGATAGATAATCGTAATAAAA
ACGAGTCATAGGAGGTTTAT

Downstream 100 bases:

>100_bases
GGTTGAAAAGTCATGTTATTTAATATGGTTTTATTTTTTTCTTCGTTTTTTAGGTCTTTTCTTATTAAGAACTTTATTTA
ATAGTTGTATTTGTTCTTCA

Product: pirin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSEVMQKNRTVVQTISGVETSDGDGVKLTRIIGTQKLDVLDPFLLLDCFESDDASDYIGGFPTHPHRGFETVSYLLNGKM
RHKDSAGHEGVVESGGVQWMTAGKGVLHSEMPEQEEGLLKGFQLWVNLPKASKMIEPAYQEYPPETTPLEKRENGIEIRV
IAGSTNLGTKGPVNNVHVYPTYMDINIPRGQMLEQSLPFEHNAFIYVIEGNVGIKSDDNQVQTVDMRSLAVFGKGQNVSF
VADDSSARFLLVAGKPLNEPIARGGPFVMNTRAEVLQAFDDFNQGRFH

Sequences:

>Translated_288_residues
MSEVMQKNRTVVQTISGVETSDGDGVKLTRIIGTQKLDVLDPFLLLDCFESDDASDYIGGFPTHPHRGFETVSYLLNGKM
RHKDSAGHEGVVESGGVQWMTAGKGVLHSEMPEQEEGLLKGFQLWVNLPKASKMIEPAYQEYPPETTPLEKRENGIEIRV
IAGSTNLGTKGPVNNVHVYPTYMDINIPRGQMLEQSLPFEHNAFIYVIEGNVGIKSDDNQVQTVDMRSLAVFGKGQNVSF
VADDSSARFLLVAGKPLNEPIARGGPFVMNTRAEVLQAFDDFNQGRFH
>Mature_287_residues
SEVMQKNRTVVQTISGVETSDGDGVKLTRIIGTQKLDVLDPFLLLDCFESDDASDYIGGFPTHPHRGFETVSYLLNGKMR
HKDSAGHEGVVESGGVQWMTAGKGVLHSEMPEQEEGLLKGFQLWVNLPKASKMIEPAYQEYPPETTPLEKRENGIEIRVI
AGSTNLGTKGPVNNVHVYPTYMDINIPRGQMLEQSLPFEHNAFIYVIEGNVGIKSDDNQVQTVDMRSLAVFGKGQNVSFV
ADDSSARFLLVAGKPLNEPIARGGPFVMNTRAEVLQAFDDFNQGRFH

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=285, Percent_Identity=43.859649122807, Blast_Score=210, Evalue=1e-54,
Organism=Homo sapiens, GI4505823, Length=285, Percent_Identity=43.859649122807, Blast_Score=210, Evalue=1e-54,
Organism=Escherichia coli, GI1789847, Length=206, Percent_Identity=28.6407766990291, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 31799; Mature: 31668

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVMQKNRTVVQTISGVETSDGDGVKLTRIIGTQKLDVLDPFLLLDCFESDDASDYIGG
CCHHHHHCCCEEEHHCCCCCCCCCCEEEEEEECCCCHHHHCHHHEEEECCCCCCCHHCCC
FPTHPHRGFETVSYLLNGKMRHKDSAGHEGVVESGGVQWMTAGKGVLHSEMPEQEEGLLK
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCHHHHHHH
GFQLWVNLPKASKMIEPAYQEYPPETTPLEKRENGIEIRVIAGSTNLGTKGPVNNVHVYP
HHHHEEECCHHHHHHCCHHHHCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCEEEEE
TYMDINIPRGQMLEQSLPFEHNAFIYVIEGNVGIKSDDNQVQTVDMRSLAVFGKGQNVSF
EEEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCEEE
VADDSSARFLLVAGKPLNEPIARGGPFVMNTRAEVLQAFDDFNQGRFH
EECCCCCEEEEEECCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SEVMQKNRTVVQTISGVETSDGDGVKLTRIIGTQKLDVLDPFLLLDCFESDDASDYIGG
CHHHHHCCCEEEHHCCCCCCCCCCEEEEEEECCCCHHHHCHHHEEEECCCCCCCHHCCC
FPTHPHRGFETVSYLLNGKMRHKDSAGHEGVVESGGVQWMTAGKGVLHSEMPEQEEGLLK
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCHHHHHHH
GFQLWVNLPKASKMIEPAYQEYPPETTPLEKRENGIEIRVIAGSTNLGTKGPVNNVHVYP
HHHHEEECCHHHHHHCCHHHHCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCEEEEE
TYMDINIPRGQMLEQSLPFEHNAFIYVIEGNVGIKSDDNQVQTVDMRSLAVFGKGQNVSF
EEEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCEEE
VADDSSARFLLVAGKPLNEPIARGGPFVMNTRAEVLQAFDDFNQGRFH
EECCCCCEEEEEECCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]