| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is stp [H]
Identifier: 59711598
GI number: 59711598
Start: 1091935
End: 1092606
Strand: Reverse
Name: stp [H]
Synonym: VF_0991
Alternate gene names: 59711598
Gene position: 1092606-1091935 (Counterclockwise)
Preceding gene: 172087682
Following gene: 59711597
Centisome position: 37.71
GC content: 38.39
Gene sequence:
>672_bases ATGAGCCAACAATTTCAAACGGCCCATTTTTCAGAAGAAGGCAAGGTAAGAGACAAAAACGAAGATGCAATTTTATCTTT TACCGAGCAAGGTATCTGGATAATAGCAGATGGCATGGGTGGATATGAGTATGGTGAAATTGCGAGTGGAATGATTGTTG ATGCCTTCCACTCCGAATTGCTCTACGGCAGCCTAGAGCAAAAAATTGATAAAGCAAAGAGAATGCTTTTAAAAGTGAAT CACCATTTAAGTCAAGAAAAGACATTATCTCATAGTGCGGTTATTGGCAGCACTGTATGCATGTTGATTGCTCATAATGG TCATATCGCCTGTCTATGGGCAGGTGATTCTCGATGTTATTTGTTTCGTCATAATAAGCTATACCAGATATCGAAAGATC ACACCCGTGAACAAAATGGGAAAGAGGCACTCACACAGGCCATCGGTATGGGTCACAATCTATCAATTGAACATTGCATT ATTCCATTACAACATAAAGATACTTTTCTTCTATCCAGTGATGGCGTACATAAATACTTATCAAACAATATGATTGAAGC ATGTATGGCTCTCCCAAGTGCTCTAAAAGGCTGCTATCACTTAAAAGAGCAAGTATTACTAACAGAAGCAAATGATAATT TATCTGCCATTATGATTAAGGCCAACAGATGA
Upstream 100 bases:
>100_bases AAGGAATGAAAGCCAAATACCTTATTTATAGTGATCGAACCCCTAATCCTTTTAATAGAAAAATATTAACGAATTTCTAT CTTCCAAAAAGGATTAATGG
Downstream 100 bases:
>100_bases CTGATATCAATATAGATCACTTTATTGCCGATGACTCTGATGAATTAAATACAGAATCAACGCGAAAGGAAGCAAATACT CTCCCTCTTCCAAAAGTCAT
Product: protein phosphatase 2C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSQQFQTAHFSEEGKVRDKNEDAILSFTEQGIWIIADGMGGYEYGEIASGMIVDAFHSELLYGSLEQKIDKAKRMLLKVN HHLSQEKTLSHSAVIGSTVCMLIAHNGHIACLWAGDSRCYLFRHNKLYQISKDHTREQNGKEALTQAIGMGHNLSIEHCI IPLQHKDTFLLSSDGVHKYLSNNMIEACMALPSALKGCYHLKEQVLLTEANDNLSAIMIKANR
Sequences:
>Translated_223_residues MSQQFQTAHFSEEGKVRDKNEDAILSFTEQGIWIIADGMGGYEYGEIASGMIVDAFHSELLYGSLEQKIDKAKRMLLKVN HHLSQEKTLSHSAVIGSTVCMLIAHNGHIACLWAGDSRCYLFRHNKLYQISKDHTREQNGKEALTQAIGMGHNLSIEHCI IPLQHKDTFLLSSDGVHKYLSNNMIEACMALPSALKGCYHLKEQVLLTEANDNLSAIMIKANR >Mature_222_residues SQQFQTAHFSEEGKVRDKNEDAILSFTEQGIWIIADGMGGYEYGEIASGMIVDAFHSELLYGSLEQKIDKAKRMLLKVNH HLSQEKTLSHSAVIGSTVCMLIAHNGHIACLWAGDSRCYLFRHNKLYQISKDHTREQNGKEALTQAIGMGHNLSIEHCII PLQHKDTFLLSSDGVHKYLSNNMIEACMALPSALKGCYHLKEQVLLTEANDNLSAIMIKANR
Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 24957; Mature: 24826
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQFQTAHFSEEGKVRDKNEDAILSFTEQGIWIIADGMGGYEYGEIASGMIVDAFHSEL CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHCCHHHHHHHHHH LYGSLEQKIDKAKRMLLKVNHHLSQEKTLSHSAVIGSTVCMLIAHNGHIACLWAGDSRCY HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEE LFRHNKLYQISKDHTREQNGKEALTQAIGMGHNLSIEHCIIPLQHKDTFLLSSDGVHKYL EEECCEEEEECCHHCCCCCHHHHHHHHHCCCCCCCHHEEEEEECCCCEEEEECCCHHHHH SNNMIEACMALPSALKGCYHLKEQVLLTEANDNLSAIMIKANR HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEECC >Mature Secondary Structure SQQFQTAHFSEEGKVRDKNEDAILSFTEQGIWIIADGMGGYEYGEIASGMIVDAFHSEL CCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHCCHHHHHHHHHH LYGSLEQKIDKAKRMLLKVNHHLSQEKTLSHSAVIGSTVCMLIAHNGHIACLWAGDSRCY HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEE LFRHNKLYQISKDHTREQNGKEALTQAIGMGHNLSIEHCIIPLQHKDTFLLSSDGVHKYL EEECCEEEEECCHHCCCCCHHHHHHHHHCCCCCCCHHEEEEEECCCCEEEEECCCHHHHH SNNMIEACMALPSALKGCYHLKEQVLLTEANDNLSAIMIKANR HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]