| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711588
Identifier: 59711588
GI number: 59711588
Start: 1076762
End: 1077358
Strand: Direct
Name: 59711588
Synonym: VF_0981
Alternate gene names: NA
Gene position: 1076762-1077358 (Clockwise)
Preceding gene: 59711584
Following gene: 59711592
Centisome position: 37.16
GC content: 36.68
Gene sequence:
>597_bases ATGCTATCCTATTGTTTATTAGCTTTAATCCCTGCTATTGCATTTTATGCATTATCACTATTTGCTCTTAACAAGGCACT AGGTTTCACTCCTATGGAAGTGCTGAGAGACTTGGCACAACAAACAGAAGTGCACAGTTTCCGTGGGTTTCTTTCAAACA TTGGTGTGTGGTTTTGGGTTGGCTCAATTTCAATTGCTTTTTTCAGCGCAATTTTTATTCAAAGTGGTAAGACGCAACGT TTACTTTTTCTAATGGGAACGCTGGCATCAATTTTAGCTGTTGATGATTTTTTCTTGATTCATGACCGATACGTAAATCA ATATATTTGTTATTTCTTTTATGCTGTCGTTGCACTTGCCATTTTAGCGTTACATTACAAAGATATTATTGAAATAGATG GCTTCTCATTTTTACTGGCTGGTGGGTTGCTAGCAAGTTCTATTGGTACTGATGTGATTCAAGGTTATTTACCTTTTGGT TACGAAATTACTCAAATTTTTGAGGAAGGCTGTAAATTTGCAGGTGCGGTATCTTGGTTCTACTTTACTTGTGTTGTCGC ATCATTTGGAGTGACAAGAGTTAAGAACCAAGCTTGA
Upstream 100 bases:
>100_bases TTTCTTAAAAGATAGATTATTGCGCCACATTTATTACAAGAAATAATTAAAGAGGTGTGTTTTGAACACTATTTTACGTC AGATTTTTAATCCTAAAAGA
Downstream 100 bases:
>100_bases TAAGGATTGAGCAGTATTTAAATATGAATACTGCTCTTTTTTATACAGATTAAGATTGATGATGTCTTTTTTCTAATTTC TGATTAACAAGAAGCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLSYCLLALIPAIAFYALSLFALNKALGFTPMEVLRDLAQQTEVHSFRGFLSNIGVWFWVGSISIAFFSAIFIQSGKTQR LLFLMGTLASILAVDDFFLIHDRYVNQYICYFFYAVVALAILALHYKDIIEIDGFSFLLAGGLLASSIGTDVIQGYLPFG YEITQIFEEGCKFAGAVSWFYFTCVVASFGVTRVKNQA
Sequences:
>Translated_198_residues MLSYCLLALIPAIAFYALSLFALNKALGFTPMEVLRDLAQQTEVHSFRGFLSNIGVWFWVGSISIAFFSAIFIQSGKTQR LLFLMGTLASILAVDDFFLIHDRYVNQYICYFFYAVVALAILALHYKDIIEIDGFSFLLAGGLLASSIGTDVIQGYLPFG YEITQIFEEGCKFAGAVSWFYFTCVVASFGVTRVKNQA >Mature_198_residues MLSYCLLALIPAIAFYALSLFALNKALGFTPMEVLRDLAQQTEVHSFRGFLSNIGVWFWVGSISIAFFSAIFIQSGKTQR LLFLMGTLASILAVDDFFLIHDRYVNQYICYFFYAVVALAILALHYKDIIEIDGFSFLLAGGLLASSIGTDVIQGYLPFG YEITQIFEEGCKFAGAVSWFYFTCVVASFGVTRVKNQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22069; Mature: 22069
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYCLLALIPAIAFYALSLFALNKALGFTPMEVLRDLAQQTEVHSFRGFLSNIGVWFWV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSISIAFFSAIFIQSGKTQRLLFLMGTLASILAVDDFFLIHDRYVNQYICYFFYAVVALA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILALHYKDIIEIDGFSFLLAGGLLASSIGTDVIQGYLPFGYEITQIFEEGCKFAGAVSWF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YFTCVVASFGVTRVKNQA HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLSYCLLALIPAIAFYALSLFALNKALGFTPMEVLRDLAQQTEVHSFRGFLSNIGVWFWV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSISIAFFSAIFIQSGKTQRLLFLMGTLASILAVDDFFLIHDRYVNQYICYFFYAVVALA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILALHYKDIIEIDGFSFLLAGGLLASSIGTDVIQGYLPFGYEITQIFEEGCKFAGAVSWF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YFTCVVASFGVTRVKNQA HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA