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The map label for this gene is tolR [H]

Identifier: 59711566

GI number: 59711566

Start: 1053395

End: 1053841

Strand: Direct

Name: tolR [H]

Synonym: VF_0959

Alternate gene names: 59711566

Gene position: 1053395-1053841 (Clockwise)

Preceding gene: 59711565

Following gene: 172087680

Centisome position: 36.35

GC content: 38.03

Gene sequence:

>447_bases
ATGTCTGGTTATCAACCTAAAAAACGTAAGTTAACTGCTGAAATCAATGTAGTTCCATACATTGATGTAATGTTAGTACT
ATTAATTATTTTCATGGTAACCGCTCCTTTTGTGACTCAAGGTGTTGATGTTGATTTACCTGAAATGACCAATACGAAAT
CAGCACAAGCAATGGCAGGAGAAGATCCTAATGCGACATTTATTATCGTTGAAGTAGATAAAGACGGTAATTTAGGTTTA
AGTGTTGATAACCAAGAAGTGCGCCGACCTATGTCGATGCAAGAAATGATCACTAATGTAAAAGCTGAATTAAGTATTAA
ACCAAACTCTCCAGTAGCGGTGGGTGGGGATGCTAGTACACCTTATGCTGAAATTGTTTTGGTTTTGGATGAATTGAGTC
GAGCGGGCGTTAGTAAAGTAGGCTTGCTCACTGATCTCAAGGAATAG

Upstream 100 bases:

>100_bases
TAAGTGTTAAAGTAGGCAAGTTAGAACACAACTATGCTGCATTTATGGATGAGTTCTCAAGTATTCTTCACCGTCAAGCT
ATGGCGAGTCAGGAGAAGTA

Downstream 100 bases:

>100_bases
AAGTGAATAACCATTGATGAAAGCGGATAATAATTACACATTTGCCATTGGTGTTTCTGTAGTGCTTCACTTACTGTTAG
TGATAGCACTGATATTTGGT

Product: membrane spanning protein in TolA-TolQ-TolR complex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSGYQPKKRKLTAEINVVPYIDVMLVLLIIFMVTAPFVTQGVDVDLPEMTNTKSAQAMAGEDPNATFIIVEVDKDGNLGL
SVDNQEVRRPMSMQEMITNVKAELSIKPNSPVAVGGDASTPYAEIVLVLDELSRAGVSKVGLLTDLKE

Sequences:

>Translated_148_residues
MSGYQPKKRKLTAEINVVPYIDVMLVLLIIFMVTAPFVTQGVDVDLPEMTNTKSAQAMAGEDPNATFIIVEVDKDGNLGL
SVDNQEVRRPMSMQEMITNVKAELSIKPNSPVAVGGDASTPYAEIVLVLDELSRAGVSKVGLLTDLKE
>Mature_147_residues
SGYQPKKRKLTAEINVVPYIDVMLVLLIIFMVTAPFVTQGVDVDLPEMTNTKSAQAMAGEDPNATFIIVEVDKDGNLGLS
VDNQEVRRPMSMQEMITNVKAELSIKPNSPVAVGGDASTPYAEIVLVLDELSRAGVSKVGLLTDLKE

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=130, Percent_Identity=36.1538461538462, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786959, Length=134, Percent_Identity=39.5522388059701, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16008; Mature: 15877

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYQPKKRKLTAEINVVPYIDVMLVLLIIFMVTAPFVTQGVDVDLPEMTNTKSAQAMAG
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC
EDPNATFIIVEVDKDGNLGLSVDNQEVRRPMSMQEMITNVKAELSIKPNSPVAVGGDAST
CCCCCEEEEEEECCCCCCEEEECHHHHHCCCCHHHHHHCCEEEEEECCCCCEEECCCCCC
PYAEIVLVLDELSRAGVSKVGLLTDLKE
CHHHHHHHHHHHHHCCCCHHHHHHCCCC
>Mature Secondary Structure 
SGYQPKKRKLTAEINVVPYIDVMLVLLIIFMVTAPFVTQGVDVDLPEMTNTKSAQAMAG
CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC
EDPNATFIIVEVDKDGNLGLSVDNQEVRRPMSMQEMITNVKAELSIKPNSPVAVGGDAST
CCCCCEEEEEEECCCCCCEEEECHHHHHCCCCHHHHHHCCEEEEEECCCCCEEECCCCCC
PYAEIVLVLDELSRAGVSKVGLLTDLKE
CHHHHHHHHHHHHHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]