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The map label for this gene is ybhK [C]

Identifier: 59711546

GI number: 59711546

Start: 1035275

End: 1036153

Strand: Reverse

Name: ybhK [C]

Synonym: VF_0939

Alternate gene names: 59711546

Gene position: 1036153-1035275 (Counterclockwise)

Preceding gene: 59711551

Following gene: 59711542

Centisome position: 35.76

GC content: 40.73

Gene sequence:

>879_bases
ATGATTGAACATAAAATTGTTGCTATTGGCGGCGGACACGGACTAGGTCGAGTTCTCGCAGCATTAAGTGACTTTGGTGG
CAACGCAACTGGAATTGTTGCAACAACAGATAACGGTGGTTCCACAGGCCGTATACGTGAATGCCAAGGCGGAATAGCCT
GGGGTGATACACGTAACTGTATCAATCAATTAATTATGGACCCTTCAATCAGTTCGATGATGTTTGAGTATCGCTTTAAA
GGTCAAGGTGAGCTGCACGGGCACAATTTGGGTAACTTAATGCTAACGGCGCTGGATAACTTAAGTGTTCGTCCATTAGA
TGCTATTAATCTAATTCGTGACATGCTAAAAGTTGAAACTCATATCATTCCAATGTCCGAGCATCCATCAGACTTGGGAG
CATTAACCTCAGATTTACGTAAAATATCTGGCGAAACCAATGTCGATGAAATGGATGAACTTCCTTTACGTTTATTTCTC
GACCCTGAAGTACCAGCAACACTTGAAGCCATTGATGCTGTCAAACAAGCGGATTTAATATTGCTTGGCCCTGGAAGCTT
TTTAACCAGTATTATGCCACCTCTATTACTTCCGGGTATCGGAAAAGCCATTAATTCAAACAAGAAAGCCAAAGTAGTAT
TTATTGATAACTTATCTAAAGAATTTGGCCCAGCAGGTAAGATGGATCATAGGATGATGCTTGAGTGGTGTGAACGCGCA
TGTTCAGGGCGAAAAGTAGACATTATCCTAACAGATAAAGAATTAAATGGATTACAACAAGAATACGATTGCAAGAAGAC
TGATCTCGCATCGCCAAATCATGATTGGCGACACGATAGAGAAAAGTTAAAAGACGCGATTATTGATTTACTTAAGTAA

Upstream 100 bases:

>100_bases
TTCTGTGATAACTTCATCATTTCACTAATACTGACTTGTCCTGATTTTCATTATCGAGCACACTTTAATAACTATCACTA
CATAATTAAGTATCAAAACT

Downstream 100 bases:

>100_bases
GAGTTCTCGATAAGCCATTTCAGTTTGACGCGCAATGTCTACAAATTCAGAGATATTGCGCTCAACCCATTTTTCTTGTT
TCTGCTTCGCTTTTTCTTCA

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIEHKIVAIGGGHGLGRVLAALSDFGGNATGIVATTDNGGSTGRIRECQGGIAWGDTRNCINQLIMDPSISSMMFEYRFK
GQGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVETHIIPMSEHPSDLGALTSDLRKISGETNVDEMDELPLRLFL
DPEVPATLEAIDAVKQADLILLGPGSFLTSIMPPLLLPGIGKAINSNKKAKVVFIDNLSKEFGPAGKMDHRMMLEWCERA
CSGRKVDIILTDKELNGLQQEYDCKKTDLASPNHDWRHDREKLKDAIIDLLK

Sequences:

>Translated_292_residues
MIEHKIVAIGGGHGLGRVLAALSDFGGNATGIVATTDNGGSTGRIRECQGGIAWGDTRNCINQLIMDPSISSMMFEYRFK
GQGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVETHIIPMSEHPSDLGALTSDLRKISGETNVDEMDELPLRLFL
DPEVPATLEAIDAVKQADLILLGPGSFLTSIMPPLLLPGIGKAINSNKKAKVVFIDNLSKEFGPAGKMDHRMMLEWCERA
CSGRKVDIILTDKELNGLQQEYDCKKTDLASPNHDWRHDREKLKDAIIDLLK
>Mature_292_residues
MIEHKIVAIGGGHGLGRVLAALSDFGGNATGIVATTDNGGSTGRIRECQGGIAWGDTRNCINQLIMDPSISSMMFEYRFK
GQGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVETHIIPMSEHPSDLGALTSDLRKISGETNVDEMDELPLRLFL
DPEVPATLEAIDAVKQADLILLGPGSFLTSIMPPLLLPGIGKAINSNKKAKVVFIDNLSKEFGPAGKMDHRMMLEWCERA
CSGRKVDIILTDKELNGLQQEYDCKKTDLASPNHDWRHDREKLKDAIIDLLK

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=285, Percent_Identity=51.9298245614035, Blast_Score=271, Evalue=5e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 31986; Mature: 31986

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHKIVAIGGGHGLGRVLAALSDFGGNATGIVATTDNGGSTGRIRECQGGIAWGDTRNC
CCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHH
INQLIMDPSISSMMFEYRFKGQGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVET
HHHHHCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HIIPMSEHPSDLGALTSDLRKISGETNVDEMDELPLRLFLDPEVPATLEAIDAVKQADLI
HEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHCCEE
LLGPGSFLTSIMPPLLLPGIGKAINSNKKAKVVFIDNLSKEFGPAGKMDHRMMLEWCERA
EECCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHH
CSGRKVDIILTDKELNGLQQEYDCKKTDLASPNHDWRHDREKLKDAIIDLLK
HCCCEEEEEEECCHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIEHKIVAIGGGHGLGRVLAALSDFGGNATGIVATTDNGGSTGRIRECQGGIAWGDTRNC
CCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHH
INQLIMDPSISSMMFEYRFKGQGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVET
HHHHHCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HIIPMSEHPSDLGALTSDLRKISGETNVDEMDELPLRLFLDPEVPATLEAIDAVKQADLI
HEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHCCEE
LLGPGSFLTSIMPPLLLPGIGKAINSNKKAKVVFIDNLSKEFGPAGKMDHRMMLEWCERA
EECCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHH
CSGRKVDIILTDKELNGLQQEYDCKKTDLASPNHDWRHDREKLKDAIIDLLK
HCCCEEEEEEECCHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]