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The map label for this gene is yfcE [H]

Identifier: 59711396

GI number: 59711396

Start: 863375

End: 863926

Strand: Direct

Name: yfcE [H]

Synonym: VF_0789

Alternate gene names: 59711396

Gene position: 863375-863926 (Clockwise)

Preceding gene: 59711389

Following gene: 59711399

Centisome position: 29.8

GC content: 38.04

Gene sequence:

>552_bases
GTGAAACTATTTTTTGCTTCGGATCTGCATGGATCTTTACCTGCAACCCAGCGTGTTATTGATACGTTTCTAGCTTCAAA
AGCAGATCACCTGATTTTACTTGGGGATTTAATTAATTTTGGTCCACGAAACCCATTACCTGAAGGTCACAACCCAATTG
CGGTTGCCGAATTATTAAATCAATATGCAGATTCTATCATTGCAGTAAGAGGGAATTGTGACAGTGAAGTTGATCAGATG
TTGCTTTCATTTCCTATCATGTCTGATTATCACATTGTGCTATTACCAACGGGTCAAAAATTATTTTTAACTCATGGCCA
TATTTATAATGCTGATAAGCGACCACCATTGAAAAAAGGCGATATTATCGCTCATGGTCATACGCATATTACGGTTGCTG
AGTGGGTTGGAGAGCAAATTATTTTTAATCCAGGTTCAACAACTTTCCCACGTATTGAAGGGGAGAAAGCAAGTTATGGG
TTACTTGATGGGCAGACGTTAAGTGTATGTGACTTTGAAGGTAATACTTTGCACTCGATTGATATTCAATAA

Upstream 100 bases:

>100_bases
TCTGTCTAACTAAGTATAAATTGACTTCAATGATTGGCAACTTTGCTTACATTTCCTTTATACTTTGTGTTCGCATTATA
TCGATATTTAAGGACCTTTC

Downstream 100 bases:

>100_bases
TTATATTTTTTAGATATAAAAAAAGAAGCGTAATAATCGCTTCTTTTTTATTAGTTTGAAATCATTGTTAATGCGAAAAT
AGAATACCAGAACCGTAATT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKLFFASDLHGSLPATQRVIDTFLASKADHLILLGDLINFGPRNPLPEGHNPIAVAELLNQYADSIIAVRGNCDSEVDQM
LLSFPIMSDYHIVLLPTGQKLFLTHGHIYNADKRPPLKKGDIIAHGHTHITVAEWVGEQIIFNPGSTTFPRIEGEKASYG
LLDGQTLSVCDFEGNTLHSIDIQ

Sequences:

>Translated_183_residues
MKLFFASDLHGSLPATQRVIDTFLASKADHLILLGDLINFGPRNPLPEGHNPIAVAELLNQYADSIIAVRGNCDSEVDQM
LLSFPIMSDYHIVLLPTGQKLFLTHGHIYNADKRPPLKKGDIIAHGHTHITVAEWVGEQIIFNPGSTTFPRIEGEKASYG
LLDGQTLSVCDFEGNTLHSIDIQ
>Mature_183_residues
MKLFFASDLHGSLPATQRVIDTFLASKADHLILLGDLINFGPRNPLPEGHNPIAVAELLNQYADSIIAVRGNCDSEVDQM
LLSFPIMSDYHIVLLPTGQKLFLTHGHIYNADKRPPLKKGDIIAHGHTHITVAEWVGEQIIFNPGSTTFPRIEGEKASYG
LLDGQTLSVCDFEGNTLHSIDIQ

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=177, Percent_Identity=54.8022598870056, Blast_Score=194, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 20122; Mature: 20122

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFFASDLHGSLPATQRVIDTFLASKADHLILLGDLINFGPRNPLPEGHNPIAVAELLN
CEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCCHHHHHHH
QYADSIIAVRGNCDSEVDQMLLSFPIMSDYHIVLLPTGQKLFLTHGHIYNADKRPPLKKG
HHHHCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECEEECCCCCCCCCCC
DIIAHGHTHITVAEWVGEQIIFNPGSTTFPRIEGEKASYGLLDGQTLSVCDFEGNTLHSI
CEEEECCCEEEHHHHCCCEEEECCCCCCCCEECCCCCCCEEECCCEEEEEECCCCEEEEE
DIQ
ECC
>Mature Secondary Structure
MKLFFASDLHGSLPATQRVIDTFLASKADHLILLGDLINFGPRNPLPEGHNPIAVAELLN
CEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCCHHHHHHH
QYADSIIAVRGNCDSEVDQMLLSFPIMSDYHIVLLPTGQKLFLTHGHIYNADKRPPLKKG
HHHHCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECEEECCCCCCCCCCC
DIIAHGHTHITVAEWVGEQIIFNPGSTTFPRIEGEKASYGLLDGQTLSVCDFEGNTLHSI
CEEEECCCEEEHHHHCCCEEEECCCCCCCCEECCCCCCCEEECCCEEEEEECCCCEEEEE
DIQ
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]