| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yieG [C]
Identifier: 59711344
GI number: 59711344
Start: 804021
End: 805313
Strand: Direct
Name: yieG [C]
Synonym: VF_0737
Alternate gene names: 59711344
Gene position: 804021-805313 (Clockwise)
Preceding gene: 59711342
Following gene: 59711345
Centisome position: 27.75
GC content: 40.53
Gene sequence:
>1293_bases ATGCTTGAGAAATTATTTCAACTAAAAGCTAATGGTACGACTGTTCGTACTGAAGTTATAGCTGGTATAACCACGTTTTT AACCATGGCTTATGTTATTTTCGTTAATCCAGCTATTTTGGCGGATGCGGGAATGGATAAAGGGGCTGTATTTGTCGCGA CTTGTATTGCAGCAGCTATTGGCTGTTTCATTATGGGGTTCGTTGCAAACTTCCCGATAGCTCAAGCTCCAGGTATGGGA TTGAATGCCTTTTTTACTTATACCGTTGTTTTAGGTATGGGTCATACATGGCAAGTCGCTCTTGCTGCAGTATTTATGTC AGGGGTTTTATTTATTCTTCTTAGCTTATTTAAGATTAGAGAATTAATTATTAACTCAATTCCTCTTTCACTAAGAACGG GCATTTCTGCTGGTATTGGTTTATTTCTGGCATTTATTGCACTAAAAAATTCAGGGATTGTTGTTGATAACCCAGCGACA TTGGTTTCAATGGGCCACATTAACAGTTTTCCTGCTGTTATGGGGGCACTCGCTTTCTTTTTAACAATTGCTTTAGTGCA TCGTGGCTATAAAGCTGCTGTTATGATTGCTATTTTGGCTGTAACTGCACTGTCATTGCTTTTTGGTGATGTTCAGTATG CTGGTGTAATGTCAATGCCGCCAAGTATCGCACCTACCTTTTTACAATTAGACTTTTCTAGTGCGTTTGAACTAAGCATG CTAACCGTTGTATTTGCATTCTTATTCGTCGATTTATTTGATACAGCGGGCACTTTAGTTGGTGTATCACAGAAAGCGGG GATTATGGACAAAGACGGTAATATCCCTCGTTTAAATAAAGCGCTACTTGCTGATTCAACAGCGACATCAGTTGGTGCTT TATTGGGTACTTCAAATACGACATCGTATATTGAAAGTGTTGCAGGGGTAGCTGCGGGTGGTCGAACTGGTTTGACGGCT GTTGTTGTTGGTATTCTGTTCTTACTTGCATTGTTCTTTGCTCCATTAGCGGGTATGGTTCCGGCCTACGCAACGGCTGG AGCTTTGTTCTATGTCGCGATTTTGATGATGTCTGGTCTTGTTAGCATTGATTGGCGAGATCTTACTGAAGCAGCCCCAG TTGTTGTGGTATGCTTATTAATGCCGTTAACCTTTTCTATTGCGGATGGTATTTCATTAGGCTTTATTTCTTACGCTGCA ATTAAGTTGCTTAGTGGTAAAGGTCGTGAAGTTCACATCAGTGTTTGGGTTCTAGCTGCATTATTCACGCTGAAATTTAT TTTTACGGCATAG
Upstream 100 bases:
>100_bases GCAACTATCGCTAGAAATTAGCATAATTCCACTTTATAATTCTCAGCCAATCGATTACGCAAACGTTTAGATTGCATAAA TTCACTAGGAAATTACTCTA
Downstream 100 bases:
>100_bases TCGTTGATGACTGTGTCACTTAGAGGTTTTGTCAATTATGGCTAATAAATTTGTAATCACTTGGGATAACATGCAGATGT ATACTCGTCAGCTTGCTGAA
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MLEKLFQLKANGTTVRTEVIAGITTFLTMAYVIFVNPAILADAGMDKGAVFVATCIAAAIGCFIMGFVANFPIAQAPGMG LNAFFTYTVVLGMGHTWQVALAAVFMSGVLFILLSLFKIRELIINSIPLSLRTGISAGIGLFLAFIALKNSGIVVDNPAT LVSMGHINSFPAVMGALAFFLTIALVHRGYKAAVMIAILAVTALSLLFGDVQYAGVMSMPPSIAPTFLQLDFSSAFELSM LTVVFAFLFVDLFDTAGTLVGVSQKAGIMDKDGNIPRLNKALLADSTATSVGALLGTSNTTSYIESVAGVAAGGRTGLTA VVVGILFLLALFFAPLAGMVPAYATAGALFYVAILMMSGLVSIDWRDLTEAAPVVVVCLLMPLTFSIADGISLGFISYAA IKLLSGKGREVHISVWVLAALFTLKFIFTA
Sequences:
>Translated_430_residues MLEKLFQLKANGTTVRTEVIAGITTFLTMAYVIFVNPAILADAGMDKGAVFVATCIAAAIGCFIMGFVANFPIAQAPGMG LNAFFTYTVVLGMGHTWQVALAAVFMSGVLFILLSLFKIRELIINSIPLSLRTGISAGIGLFLAFIALKNSGIVVDNPAT LVSMGHINSFPAVMGALAFFLTIALVHRGYKAAVMIAILAVTALSLLFGDVQYAGVMSMPPSIAPTFLQLDFSSAFELSM LTVVFAFLFVDLFDTAGTLVGVSQKAGIMDKDGNIPRLNKALLADSTATSVGALLGTSNTTSYIESVAGVAAGGRTGLTA VVVGILFLLALFFAPLAGMVPAYATAGALFYVAILMMSGLVSIDWRDLTEAAPVVVVCLLMPLTFSIADGISLGFISYAA IKLLSGKGREVHISVWVLAALFTLKFIFTA >Mature_430_residues MLEKLFQLKANGTTVRTEVIAGITTFLTMAYVIFVNPAILADAGMDKGAVFVATCIAAAIGCFIMGFVANFPIAQAPGMG LNAFFTYTVVLGMGHTWQVALAAVFMSGVLFILLSLFKIRELIINSIPLSLRTGISAGIGLFLAFIALKNSGIVVDNPAT LVSMGHINSFPAVMGALAFFLTIALVHRGYKAAVMIAILAVTALSLLFGDVQYAGVMSMPPSIAPTFLQLDFSSAFELSM LTVVFAFLFVDLFDTAGTLVGVSQKAGIMDKDGNIPRLNKALLADSTATSVGALLGTSNTTSYIESVAGVAAGGRTGLTA VVVGILFLLALFFAPLAGMVPAYATAGALFYVAILMMSGLVSIDWRDLTEAAPVVVVCLLMPLTFSIADGISLGFISYAA IKLLSGKGREVHISVWVLAALFTLKFIFTA
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=426, Percent_Identity=50.9389671361502, Blast_Score=446, Evalue=1e-126, Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=50.9345794392523, Blast_Score=438, Evalue=1e-124, Organism=Escherichia coli, GI1790499, Length=426, Percent_Identity=39.2018779342723, Blast_Score=271, Evalue=4e-74, Organism=Escherichia coli, GI48994909, Length=426, Percent_Identity=37.793427230047, Blast_Score=257, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45026; Mature: 45026
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLFQLKANGTTVRTEVIAGITTFLTMAYVIFVNPAILADAGMDKGAVFVATCIAAAI CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHH GCFIMGFVANFPIAQAPGMGLNAFFTYTVVLGMGHTWQVALAAVFMSGVLFILLSLFKIR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELIINSIPLSLRTGISAGIGLFLAFIALKNSGIVVDNPATLVSMGHINSFPAVMGALAFF HHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCCEEEECCHHEEEECCCCCHHHHHHHHHHH LTIALVHRGYKAAVMIAILAVTALSLLFGDVQYAGVMSMPPSIAPTFLQLDFSSAFELSM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHH LTVVFAFLFVDLFDTAGTLVGVSQKAGIMDKDGNIPRLNKALLADSTATSVGALLGTSNT HHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH TSYIESVAGVAAGGRTGLTAVVVGILFLLALFFAPLAGMVPAYATAGALFYVAILMMSGL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSIDWRDLTEAAPVVVVCLLMPLTFSIADGISLGFISYAAIKLLSGKGREVHISVWVLAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH LFTLKFIFTA HHHHHHHHCC >Mature Secondary Structure MLEKLFQLKANGTTVRTEVIAGITTFLTMAYVIFVNPAILADAGMDKGAVFVATCIAAAI CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHH GCFIMGFVANFPIAQAPGMGLNAFFTYTVVLGMGHTWQVALAAVFMSGVLFILLSLFKIR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELIINSIPLSLRTGISAGIGLFLAFIALKNSGIVVDNPATLVSMGHINSFPAVMGALAFF HHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCCEEEECCHHEEEECCCCCHHHHHHHHHHH LTIALVHRGYKAAVMIAILAVTALSLLFGDVQYAGVMSMPPSIAPTFLQLDFSSAFELSM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHH LTVVFAFLFVDLFDTAGTLVGVSQKAGIMDKDGNIPRLNKALLADSTATSVGALLGTSNT HHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH TSYIESVAGVAAGGRTGLTAVVVGILFLLALFFAPLAGMVPAYATAGALFYVAILMMSGL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSIDWRDLTEAAPVVVVCLLMPLTFSIADGISLGFISYAAIKLLSGKGREVHISVWVLAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH LFTLKFIFTA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]