| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pgpA [H]
Identifier: 59711313
GI number: 59711313
Start: 773240
End: 773743
Strand: Direct
Name: pgpA [H]
Synonym: VF_0706
Alternate gene names: 59711313
Gene position: 773240-773743 (Clockwise)
Preceding gene: 59711312
Following gene: 59711314
Centisome position: 26.69
GC content: 37.7
Gene sequence:
>504_bases ATGACAAATCCTCTAGCCTTAATTAGTCTTAAAAATCCGTGGCATTTATTAGCTACTGGGTTTGGGAGTGGCCTCTCTCC AATAATTCCAGGAACAATGGGCACACTGGCTGCGATTCCTTTGTATTTATTACTTGCTCAGTTACCATTTACTTTGTTTG TCATAGCGGTTACTGCCTCTGCTCTTATTGGTATTAAGATTTGCGACATTACTTCAACTGATATGAAGGTTCATGACCAT GGATCAATTGTATGGGATGAGTTTGTTGGTCTATGGATCACCATGAGCATTGTTCCATATTTAAATTTAGAAGTAACTGA TTGGAAATGGTTACTAACTGGTTTTATTTTGTTTCGATTTTTCGACATGGTAAAACCTTGGCCAATTGGATGGTTAGATA ATAAAGTTCATGGCGGCTTTGGCATCATGCTTGATGATATTGTTGCTGGATTTATGGCTCTAATTAGCCTTTGGTTAGTT GGAAAGTATTCTGGTTGGTTGTAA
Upstream 100 bases:
>100_bases ATAAACCATTTAACGGTTTACCAGATAGTGTACAATTGTTTGATAATAATAAACTATTAGATTGGAAATTATTAGGTTAC GACCACTTTAGGAGAGAACA
Downstream 100 bases:
>100_bases TGCGCAACGGTAGATTATTATTAAGCTTCCTATTTATATCGCTTATTTCATTTTTTTGTACCTCTAAACTGGTTTTAGCT GATCCTGTTTTAGTTGGATA
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTNPLALISLKNPWHLLATGFGSGLSPIIPGTMGTLAAIPLYLLLAQLPFTLFVIAVTASALIGIKICDITSTDMKVHDH GSIVWDEFVGLWITMSIVPYLNLEVTDWKWLLTGFILFRFFDMVKPWPIGWLDNKVHGGFGIMLDDIVAGFMALISLWLV GKYSGWL
Sequences:
>Translated_167_residues MTNPLALISLKNPWHLLATGFGSGLSPIIPGTMGTLAAIPLYLLLAQLPFTLFVIAVTASALIGIKICDITSTDMKVHDH GSIVWDEFVGLWITMSIVPYLNLEVTDWKWLLTGFILFRFFDMVKPWPIGWLDNKVHGGFGIMLDDIVAGFMALISLWLV GKYSGWL >Mature_166_residues TNPLALISLKNPWHLLATGFGSGLSPIIPGTMGTLAAIPLYLLLAQLPFTLFVIAVTASALIGIKICDITSTDMKVHDHG SIVWDEFVGLWITMSIVPYLNLEVTDWKWLLTGFILFRFFDMVKPWPIGWLDNKVHGGFGIMLDDIVAGFMALISLWLVG KYSGWL
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=158, Percent_Identity=53.7974683544304, Blast_Score=181, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 18507; Mature: 18376
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPLALISLKNPWHLLATGFGSGLSPIIPGTMGTLAAIPLYLLLAQLPFTLFVIAVTAS CCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIGIKICDITSTDMKVHDHGSIVWDEFVGLWITMSIVPYLNLEVTDWKWLLTGFILFRF HHHEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH FDMVKPWPIGWLDNKVHGGFGIMLDDIVAGFMALISLWLVGKYSGWL HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNPLALISLKNPWHLLATGFGSGLSPIIPGTMGTLAAIPLYLLLAQLPFTLFVIAVTAS CCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIGIKICDITSTDMKVHDHGSIVWDEFVGLWITMSIVPYLNLEVTDWKWLLTGFILFRF HHHEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH FDMVKPWPIGWLDNKVHGGFGIMLDDIVAGFMALISLWLVGKYSGWL HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]