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The map label for this gene is yejB [H]

Identifier: 59711295

GI number: 59711295

Start: 751172

End: 752200

Strand: Direct

Name: yejB [H]

Synonym: VF_0688

Alternate gene names: 59711295

Gene position: 751172-752200 (Clockwise)

Preceding gene: 172087676

Following gene: 59711296

Centisome position: 25.92

GC content: 39.07

Gene sequence:

>1029_bases
ATGATATCTTACCTACTTAGGCGACTTTTATTAGTTGTTCCTACCTTTATCGGTATTACTTTACTTATTTTTGCTCTTAC
TCGATTTGTTCCGGGTGGGCCAGTAGAGCGTATGCTACTAAGTCTACAAATGCAGGGTGCTTCAGAAACGGGAGGCACAA
GCAGTGTTACCGATGGTAATAACGCCTTATCAGAAGAGCAGATTGAAGAACTGAATGCGTTTTATGGCTTAGATAAGCCG
GTGTTTGAAGCGTATTATGATTGGTTAACCAAATTGGTTGTTTTAGATTTGGGTGAGTCTACTCGTTATTATGAACCAGT
TTGGGACATGATAGCCGAACGTTTACCGGTTTCTCTCTTTTATGGAGGGATGACGTTTCTGCTCAGTTATCTCATATCCA
TTCCGCTTGGTTACTTAAAAGCGCTAAAACACGGTTCTATCTTAGATTCGACTTCGTCAATTGCCATTTTTGTTGGTTTT
GCTTTACCCGGTTATGTCATTGGGGTCTTTTTGATTAGCTTGTTCAGTTATCAATTAGAGTGGTTTCCAATGGGCGGTTT
TATTAGTGATGACTTTGATGATTTTGGTGCATTTGAACAAATCAAAGACATCATGTGGCATGCCATTCTTCCTCTCTTTT
GTTATTTGATCGGTGACTTTGCCTTACTTACCATGACGATGAAAAATAATTTAATGGAGAACTTAGCGTCTGATTATGTT
CGTACCGCGATTGCTAAAGGATTGCCATTTAGAAAAGCAGTTCGTAAACACGCATTGCGTAATAGTTTAATTCCTGTTGC
GAGTCATTTTGGTAATTCGTTAATGTTTTTTATGACGGGTTCATTCTTAATTGAGGTTATTTTTAATATTGATGGCATTG
GGTTGCTTGGATACGAAGCCATTATGGAGCGTGATTATCCTGTTGTAATGGGATTGTTTGCGATTAATGCCATGATGTTA
ATGATAGGCAATATTTTGTCTGATGTGTGTGTTGCTGTGGTGGATCCACGCGTGAAGTTTGGAGCCTAG

Upstream 100 bases:

>100_bases
ATAAAATTATTATAAAAATAAATACAGTTCGGGCTAGAAATATAGCCTAACTCGTATTACGACAACGGAGTTTGTCGAAG
GACATGGAGTACTGTCACGG

Downstream 100 bases:

>100_bases
TTATGACATTATCATTCAATTTAAGTCCATTAACGCAAAAGAAAATCCAACGTTTTAAAGGGATCAAAAGAGGTTATTGG
TCATTCTTAATTTTATCAGC

Product: oligopeptide transporter subunit

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MISYLLRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGASETGGTSSVTDGNNALSEEQIEELNAFYGLDKP
VFEAYYDWLTKLVVLDLGESTRYYEPVWDMIAERLPVSLFYGGMTFLLSYLISIPLGYLKALKHGSILDSTSSIAIFVGF
ALPGYVIGVFLISLFSYQLEWFPMGGFISDDFDDFGAFEQIKDIMWHAILPLFCYLIGDFALLTMTMKNNLMENLASDYV
RTAIAKGLPFRKAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEAIMERDYPVVMGLFAINAMML
MIGNILSDVCVAVVDPRVKFGA

Sequences:

>Translated_342_residues
MISYLLRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGASETGGTSSVTDGNNALSEEQIEELNAFYGLDKP
VFEAYYDWLTKLVVLDLGESTRYYEPVWDMIAERLPVSLFYGGMTFLLSYLISIPLGYLKALKHGSILDSTSSIAIFVGF
ALPGYVIGVFLISLFSYQLEWFPMGGFISDDFDDFGAFEQIKDIMWHAILPLFCYLIGDFALLTMTMKNNLMENLASDYV
RTAIAKGLPFRKAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEAIMERDYPVVMGLFAINAMML
MIGNILSDVCVAVVDPRVKFGA
>Mature_342_residues
MISYLLRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGASETGGTSSVTDGNNALSEEQIEELNAFYGLDKP
VFEAYYDWLTKLVVLDLGESTRYYEPVWDMIAERLPVSLFYGGMTFLLSYLISIPLGYLKALKHGSILDSTSSIAIFVGF
ALPGYVIGVFLISLFSYQLEWFPMGGFISDDFDDFGAFEQIKDIMWHAILPLFCYLIGDFALLTMTMKNNLMENLASDYV
RTAIAKGLPFRKAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEAIMERDYPVVMGLFAINAMML
MIGNILSDVCVAVVDPRVKFGA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=37.3961218836565, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1789965, Length=355, Percent_Identity=33.2394366197183, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787497, Length=341, Percent_Identity=29.0322580645161, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787053, Length=340, Percent_Identity=26.4705882352941, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1789888, Length=339, Percent_Identity=26.8436578171091, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787761, Length=354, Percent_Identity=27.9661016949153, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1787550, Length=276, Percent_Identity=22.463768115942, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38143; Mature: 38143

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISYLLRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGASETGGTSSVTDGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NALSEEQIEELNAFYGLDKPVFEAYYDWLTKLVVLDLGESTRYYEPVWDMIAERLPVSLF
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH
YGGMTFLLSYLISIPLGYLKALKHGSILDSTSSIAIFVGFALPGYVIGVFLISLFSYQLE
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFPMGGFISDDFDDFGAFEQIKDIMWHAILPLFCYLIGDFALLTMTMKNNLMENLASDYV
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAIAKGLPFRKAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEA
HHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IMERDYPVVMGLFAINAMMLMIGNILSDVCVAVVDPRVKFGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISYLLRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGASETGGTSSVTDGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NALSEEQIEELNAFYGLDKPVFEAYYDWLTKLVVLDLGESTRYYEPVWDMIAERLPVSLF
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH
YGGMTFLLSYLISIPLGYLKALKHGSILDSTSSIAIFVGFALPGYVIGVFLISLFSYQLE
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFPMGGFISDDFDDFGAFEQIKDIMWHAILPLFCYLIGDFALLTMTMKNNLMENLASDYV
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAIAKGLPFRKAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEA
HHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IMERDYPVVMGLFAINAMMLMIGNILSDVCVAVVDPRVKFGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]