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The map label for this gene is 59711234

Identifier: 59711234

GI number: 59711234

Start: 683365

End: 683997

Strand: Direct

Name: 59711234

Synonym: VF_0627

Alternate gene names: NA

Gene position: 683365-683997 (Clockwise)

Preceding gene: 59711233

Following gene: 59711235

Centisome position: 23.58

GC content: 40.6

Gene sequence:

>633_bases
ATGAGAAAATGGAGTGCAGCACTATTAACGATTGGATTGTTAACAAGTGCTGGTTGCGTCACTGTTGACGAAGCCGATGA
AATGACCAAAGAAGAGGTAATTCGAGCTGCTGAAGCTCGAATTACACTTGGATTAAGCTACTTAAATGCGGGCGATATGA
TGAAAGCTCGCGAGAATTTGGAACTGGCTGTACAATACGCTCCCGACTATTACCGCTCTCAAACCTCCCTCGCTTATTAT
TATCAACAAGTAGAAGAAGACGATTTAGCTGAAAAGGCATACAAACGAGCATTACGTTATTCGTCAAAAAATGGTAATGT
ATTAAATAACTACGGCGTTTTTCTATGTAAAAAGGGCCGATATGAGGAAGCTCAAGAGAAGTTTACTCAAGCAATAGACC
AACCTTACTACTATCTTGTCTCGGCAAGTTATGAAAATGCAGCGATGTGCGCATTAAGTAGTGGGGATAAAGTGACAGCA
AAAAGGTATTTTGAGCGCTCGTTGGCTCATGATCCGAATCGGATTCGCTCGACCCTTCAATTGGCTAAATTGAATATTGA
CGAAGGTAACTATTCAGAACCGAGAATTTCGCTGTTTAAATTTAATAAGAAGTACGGATACAAACCCGTTTAG

Upstream 100 bases:

>100_bases
TGTAATCGACAGAACTAAACGCACTAAAGTTAAACAGCAAGGTGAGGCAATCCCTGTAAAAACTGTTTAATCTTGGTGTA
TTACAGCAAGGGAAGGCAGG

Downstream 100 bases:

>100_bases
CCTAAGCTTACTCATAGAATTAGAAAAAAAAGCAGGCAATGCGCATTTAGTTAAAAAATACGCAAATATTCTGGGGAAAG
AGTATCCGGACTCGCGAGAA

Product: type IV pilus biogenesis/stability protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRKWSAALLTIGLLTSAGCVTVDEADEMTKEEVIRAAEARITLGLSYLNAGDMMKARENLELAVQYAPDYYRSQTSLAYY
YQQVEEDDLAEKAYKRALRYSSKNGNVLNNYGVFLCKKGRYEEAQEKFTQAIDQPYYYLVSASYENAAMCALSSGDKVTA
KRYFERSLAHDPNRIRSTLQLAKLNIDEGNYSEPRISLFKFNKKYGYKPV

Sequences:

>Translated_210_residues
MRKWSAALLTIGLLTSAGCVTVDEADEMTKEEVIRAAEARITLGLSYLNAGDMMKARENLELAVQYAPDYYRSQTSLAYY
YQQVEEDDLAEKAYKRALRYSSKNGNVLNNYGVFLCKKGRYEEAQEKFTQAIDQPYYYLVSASYENAAMCALSSGDKVTA
KRYFERSLAHDPNRIRSTLQLAKLNIDEGNYSEPRISLFKFNKKYGYKPV
>Mature_210_residues
MRKWSAALLTIGLLTSAGCVTVDEADEMTKEEVIRAAEARITLGLSYLNAGDMMKARENLELAVQYAPDYYRSQTSLAYY
YQQVEEDDLAEKAYKRALRYSSKNGNVLNNYGVFLCKKGRYEEAQEKFTQAIDQPYYYLVSASYENAAMCALSSGDKVTA
KRYFERSLAHDPNRIRSTLQLAKLNIDEGNYSEPRISLFKFNKKYGYKPV

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23988; Mature: 23988

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKWSAALLTIGLLTSAGCVTVDEADEMTKEEVIRAAEARITLGLSYLNAGDMMKARENL
CCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHCCC
ELAVQYAPDYYRSQTSLAYYYQQVEEDDLAEKAYKRALRYSSKNGNVLNNYGVFLCKKGR
EEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCC
YEEAQEKFTQAIDQPYYYLVSASYENAAMCALSSGDKVTAKRYFERSLAHDPNRIRSTLQ
CHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
LAKLNIDEGNYSEPRISLFKFNKKYGYKPV
HHHEECCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRKWSAALLTIGLLTSAGCVTVDEADEMTKEEVIRAAEARITLGLSYLNAGDMMKARENL
CCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHCCC
ELAVQYAPDYYRSQTSLAYYYQQVEEDDLAEKAYKRALRYSSKNGNVLNNYGVFLCKKGR
EEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCC
YEEAQEKFTQAIDQPYYYLVSASYENAAMCALSSGDKVTAKRYFERSLAHDPNRIRSTLQ
CHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
LAKLNIDEGNYSEPRISLFKFNKKYGYKPV
HHHEECCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]