Click here to switch to the map view.

The map label for this gene is tadD1

Identifier: 59711126

GI number: 59711126

Start: 555187

End: 555927

Strand: Direct

Name: tadD1

Synonym: VF_0519

Alternate gene names: NA

Gene position: 555187-555927 (Clockwise)

Preceding gene: 59711125

Following gene: 59711127

Centisome position: 19.16

GC content: 34.14

Gene sequence:

>741_bases
ATGCTTAAAAAATTACTTCTAGTCTCTACAGTTCTTTTATTGTCGGCATGCAGTTCTCGTCAATACAGTGAAAGTTCATT
AACTCAGTCAAAAATTGATATTTATGAGCAAACACAAAATTACGTCGCTTTATCTGATTTATATAAAGCGGAATTGAAAA
AAGAGGATTCTGAAGAAATACGAGAAGCCCTTGCTGCCGCATTATTGCATTTAGAAGATCCTGAAAGTGCGTTGTTCTAT
TTAAAACCAAACATTGAAAATGGAGCAAGCTTTCAAAGTTATTACCTTCAAGCTTCTGCTTTAGGAGACTTAGGAAAATA
TCCTCAAGCAATAAAAGCAGCCTTACTTTCATTGGAAGAAAACCCTGATAACCCTGAAACGGAAAACTTATTAGGGATTT
TATATGGTCATGAATATCAATATGAAAAGTCACGCAGATACTTTCAAAAAGCACAGTTGCATTTTTATGATAGCAATACG
ATAGCCAATAATTTAGCGGTTTTGGATATTGCCGAAGGTAATTACAAACGAGCCGCACAACGATTATTGCCAGTTTATCG
TAGCGGACAAGCTAATGAACAAGTGATGGCCAATTTAATACTAAGCATGGCTAAAGAGCAGAATCTTGAATTTATTCAGG
CTGTGCTAGGTGATAAACACACAAAAAAAGAAATTGAACGTATTTATCAATCATTACAACGATTTAATTCTTTAGATATT
GATACAAAGAAAAGCGTTTAG

Upstream 100 bases:

>100_bases
GGGAAGTTAGCAGCAAAGATGTCAGTTCCACTGATCGTATTCATTATGATCCCTATTGTTATTTTAATTGCAGCACCAGG
TGTAATGAGGTTGATGTTAA

Downstream 100 bases:

>100_bases
GGTGATATATGAGAAATAAACAAAACGGTTCAGCTTCTATTGAATTTGTAATGGGTTTTATGGCGTTTTGGTTTATGTGT
ATGGCATGGGTTGAAATGAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tight Adherence Protein D; Secretion System Protein; Flp Pilus Assembly Protein Tadd Contains Tpr Repeat; NrfG Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLKKLLLVSTVLLLSACSSRQYSESSLTQSKIDIYEQTQNYVALSDLYKAELKKEDSEEIREALAAALLHLEDPESALFY
LKPNIENGASFQSYYLQASALGDLGKYPQAIKAALLSLEENPDNPETENLLGILYGHEYQYEKSRRYFQKAQLHFYDSNT
IANNLAVLDIAEGNYKRAAQRLLPVYRSGQANEQVMANLILSMAKEQNLEFIQAVLGDKHTKKEIERIYQSLQRFNSLDI
DTKKSV

Sequences:

>Translated_246_residues
MLKKLLLVSTVLLLSACSSRQYSESSLTQSKIDIYEQTQNYVALSDLYKAELKKEDSEEIREALAAALLHLEDPESALFY
LKPNIENGASFQSYYLQASALGDLGKYPQAIKAALLSLEENPDNPETENLLGILYGHEYQYEKSRRYFQKAQLHFYDSNT
IANNLAVLDIAEGNYKRAAQRLLPVYRSGQANEQVMANLILSMAKEQNLEFIQAVLGDKHTKKEIERIYQSLQRFNSLDI
DTKKSV
>Mature_246_residues
MLKKLLLVSTVLLLSACSSRQYSESSLTQSKIDIYEQTQNYVALSDLYKAELKKEDSEEIREALAAALLHLEDPESALFY
LKPNIENGASFQSYYLQASALGDLGKYPQAIKAALLSLEENPDNPETENLLGILYGHEYQYEKSRRYFQKAQLHFYDSNT
IANNLAVLDIAEGNYKRAAQRLLPVYRSGQANEQVMANLILSMAKEQNLEFIQAVLGDKHTKKEIERIYQSLQRFNSLDI
DTKKSV

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27972; Mature: 27972

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLLLVSTVLLLSACSSRQYSESSLTQSKIDIYEQTQNYVALSDLYKAELKKEDSEEI
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
REALAAALLHLEDPESALFYLKPNIENGASFQSYYLQASALGDLGKYPQAIKAALLSLEE
HHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
NPDNPETENLLGILYGHEYQYEKSRRYFQKAQLHFYDSNTIANNLAVLDIAEGNYKRAAQ
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHCCEEEEEECCCCHHHHHH
RLLPVYRSGQANEQVMANLILSMAKEQNLEFIQAVLGDKHTKKEIERIYQSLQRFNSLDI
HHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
DTKKSV
CCCCCC
>Mature Secondary Structure
MLKKLLLVSTVLLLSACSSRQYSESSLTQSKIDIYEQTQNYVALSDLYKAELKKEDSEEI
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
REALAAALLHLEDPESALFYLKPNIENGASFQSYYLQASALGDLGKYPQAIKAALLSLEE
HHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
NPDNPETENLLGILYGHEYQYEKSRRYFQKAQLHFYDSNTIANNLAVLDIAEGNYKRAAQ
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHCCEEEEEECCCCHHHHHH
RLLPVYRSGQANEQVMANLILSMAKEQNLEFIQAVLGDKHTKKEIERIYQSLQRFNSLDI
HHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
DTKKSV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA