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The map label for this gene is mshM [H]

Identifier: 59710967

GI number: 59710967

Start: 392203

End: 393051

Strand: Direct

Name: mshM [H]

Synonym: VF_0360

Alternate gene names: 59710967

Gene position: 392203-393051 (Clockwise)

Preceding gene: 59710966

Following gene: 59710968

Centisome position: 13.54

GC content: 38.99

Gene sequence:

>849_bases
ATGTATGAAGCTCACTTTGGGTTAAAGCAGTTACCATTTACACTGACACCCAATACCTCACTGTTTCATGGCTTATCGCC
TCATTATGAGGCGATTCATACCGTGTTGTCTGCGATTTCGATGGGGGAAGGGATCATCAAGGTTACAGGTGAGGTGGGAA
CCGGAAAAACATTAGTCTGCCGAATGTTGATTAATGAGTTACCTTCCAATGTGGAATTACTTTACCTTCCGAATCCGGTA
ATGAATGGTCATGAGCTTCGACAAGCTTTAGCAAAAGAGTTATGGCTTGATCAAAGTGGTGATGATATTGCATTGATTGA
TCGTATCCATGAAAAAATTATTGATCTACATGCCGAAGGAAAATTAGTCGTAGTATTCATTGATGAAGCTCAAGCCCTAA
GTGATGAAGCATTAGAAACATTACGTTTGTTTGGCAACTTAGAGACAGACTATAAAAAATTGTTACAGATAGTGCTGTTT
GGGCAGCCTGAATTGGACGAGAGATTACAACAACATAACTTAAGGCAATTGAGGCAACGAATAACGTTTTCTGCTTTATT
GAGAGCATTAAATATGAATGAAACCGTCGCTTACATTCGATATAGGATAGCTGAGTCTGGATGTGAGAATAATCCATTTT
CGCTTGTTCAAATGAAAGCGATATGGAAGGCAACAAATGGTATTCCTCGCTTAATTAATCAGGTTTGTCATAAATCTTTG
TTAATTGCCTTTTCAGAGCAAGTGAATAACGTGCCTTCAAAAGCCGTGTTTAACGCCATTATTGATACGGCTGATACTGT
TAAACCTAAGCATTACTTCCCAACATTTTGGGGATGGAGAGTTTCGTGA

Upstream 100 bases:

>100_bases
AAAGCCAACGGTTGTCGGTGTAGATACTTGGCAAGAAGAATTAGAACGTTCTCGTGACTTATTACAAGAATGGTTTCCAG
ACGAGTAATCAAAAACTGGC

Downstream 100 bases:

>100_bases
GTGTGACTAATAAAGCGTTATTAAATATAACTCGACAAGATGAAAATAAAGAAAAGCAGCACTCATTATCTCCTGCGGAT
ATACCGAATGTTGAATCAAA

Product: MSHA biogenesis protein MshM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MYEAHFGLKQLPFTLTPNTSLFHGLSPHYEAIHTVLSAISMGEGIIKVTGEVGTGKTLVCRMLINELPSNVELLYLPNPV
MNGHELRQALAKELWLDQSGDDIALIDRIHEKIIDLHAEGKLVVVFIDEAQALSDEALETLRLFGNLETDYKKLLQIVLF
GQPELDERLQQHNLRQLRQRITFSALLRALNMNETVAYIRYRIAESGCENNPFSLVQMKAIWKATNGIPRLINQVCHKSL
LIAFSEQVNNVPSKAVFNAIIDTADTVKPKHYFPTFWGWRVS

Sequences:

>Translated_282_residues
MYEAHFGLKQLPFTLTPNTSLFHGLSPHYEAIHTVLSAISMGEGIIKVTGEVGTGKTLVCRMLINELPSNVELLYLPNPV
MNGHELRQALAKELWLDQSGDDIALIDRIHEKIIDLHAEGKLVVVFIDEAQALSDEALETLRLFGNLETDYKKLLQIVLF
GQPELDERLQQHNLRQLRQRITFSALLRALNMNETVAYIRYRIAESGCENNPFSLVQMKAIWKATNGIPRLINQVCHKSL
LIAFSEQVNNVPSKAVFNAIIDTADTVKPKHYFPTFWGWRVS
>Mature_282_residues
MYEAHFGLKQLPFTLTPNTSLFHGLSPHYEAIHTVLSAISMGEGIIKVTGEVGTGKTLVCRMLINELPSNVELLYLPNPV
MNGHELRQALAKELWLDQSGDDIALIDRIHEKIIDLHAEGKLVVVFIDEAQALSDEALETLRLFGNLETDYKKLLQIVLF
GQPELDERLQQHNLRQLRQRITFSALLRALNMNETVAYIRYRIAESGCENNPFSLVQMKAIWKATNGIPRLINQVCHKSL
LIAFSEQVNNVPSKAVFNAIIDTADTVKPKHYFPTFWGWRVS

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3267

COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exeA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 31943; Mature: 31943

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEAHFGLKQLPFTLTPNTSLFHGLSPHYEAIHTVLSAISMGEGIIKVTGEVGTGKTLVC
CCCCCCCHHHCCEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
RMLINELPSNVELLYLPNPVMNGHELRQALAKELWLDQSGDDIALIDRIHEKIIDLHAEG
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
KLVVVFIDEAQALSDEALETLRLFGNLETDYKKLLQIVLFGQPELDERLQQHNLRQLRQR
CEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ITFSALLRALNMNETVAYIRYRIAESGCENNPFSLVQMKAIWKATNGIPRLINQVCHKSL
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIAFSEQVNNVPSKAVFNAIIDTADTVKPKHYFPTFWGWRVS
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYEAHFGLKQLPFTLTPNTSLFHGLSPHYEAIHTVLSAISMGEGIIKVTGEVGTGKTLVC
CCCCCCCHHHCCEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
RMLINELPSNVELLYLPNPVMNGHELRQALAKELWLDQSGDDIALIDRIHEKIIDLHAEG
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
KLVVVFIDEAQALSDEALETLRLFGNLETDYKKLLQIVLFGQPELDERLQQHNLRQLRQR
CEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ITFSALLRALNMNETVAYIRYRIAESGCENNPFSLVQMKAIWKATNGIPRLINQVCHKSL
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIAFSEQVNNVPSKAVFNAIIDTADTVKPKHYFPTFWGWRVS
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961440 [H]