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The map label for this gene is 59710958

Identifier: 59710958

GI number: 59710958

Start: 381463

End: 382779

Strand: Reverse

Name: 59710958

Synonym: VF_0351

Alternate gene names: NA

Gene position: 382779-381463 (Counterclockwise)

Preceding gene: 172087657

Following gene: 59710957

Centisome position: 13.21

GC content: 35.54

Gene sequence:

>1317_bases
GTGATACGGCCTACTAAAACGCCAATATCTTTCAACAAACTTATACTGCTTACTACTTCATTAGTAAGCAGTTCTTGTTA
TGCTTATTTAACACCAAAGCCACATATCGGCCCGGCAGGCGTAGAATACCAAAGTAATGTAGCTGTAGATTATGGCTATG
ATGATAACGTAAATTATCAGTCAGACCATACACCACATGTACAATCTGATTTCTTTAATGTTAAGCCCTTTGTGCAATTA
AAAGGGGTTCATAATGCAGATGTCTATACCTTGCAATACACAGGCGACTATAGACAATACCAAGAAAATAATACATCCGA
TGATTACTATGACCACCACATTGCATTTATTGGTGCTTGGAAAAAAGGATTGAACAACGATTTACTTTTCACCATAGAAA
ATACGATTGGTCATGAAAACCGAGGCGAAGGGTTAACTGATGGCTTATCTGCTGAACAGTTTCAAAAATATGGTATTACT
GATGTTTTAGAAACAAACATGTTTCATACAGAATTACGCTATAGTATTGATAAGCAAGATAGTATTGGAAAGTTAAGCTT
TGCAGTTCAGTACAAAGACTTTACTTATGATGACAGAACTTCCAATTTTACATCTGGAAGTATCTATAACTTTAACCAAT
ACATCGAAGAGCAAGAGTGGGATCAAACAACATTCACTATTGAATTATTTGATCAAGCATCCAGTCGAACTCGGTTTCGT
TATTCTATCGTTAGTAACTTAAGGCACTACAAAATTAATAACCTGAAAGACACTAATGAAACGTTTTTTATCGCTGGCAT
TAAAACGATCAGAACAGGAAAAACAACGATAGATGCCAATATTGCTTGGCTTTATAAAGATTTCCCCAACAACCCTGACT
CAGAAAGTTTTGGGGGATTAAACTGGGATATAGACATCAAATGGAGCCCAGTCAGACACTCTAGCTTTCATTTTTACACC
GATCAATCAGTAGAAGACCCGACAGAAATTGGTGGTTATGTTCTAAATACTGAATATGGAACTAACTGGGAACATTTTTG
GTGGTCGAGTAGACTTTCCACCACATTGGGTTACCACTATAAAACCAGTGCAGATAAAGATAAAAGCTCAGATAAAGTTG
AAACAAAAACAGAAGCTATAGCTAAAATTACCTATAAATTTAGACCTTCGATTCAATTTGAACTGAGCTACCAACAACTT
GTGAATGAATCCAATAAGGAATTCGATGATTTCACCATTAATTCAGTCGAAACGGTTACTCAAACGTTAGGCTATGATAA
ATCACTTATTATGTTTACAACTAAGGTGCAAATTTAG

Upstream 100 bases:

>100_bases
ATGGAAAAGCGTGTAGAGTATGATATTAAATACTTACAAAACTGGTCTTTATCAATGGATCTTAAGATTATTTTCTTAAC
TGTTTTCAAAGGATTTGTGA

Downstream 100 bases:

>100_bases
ATGAAACCCTTATTTATTTCTTTTTGCCTATTTCTATCTTTTGTTTCTAATGCATTGGCATCTGAAGCTCAAGAAACGCC
TTCTGATACACAAGAAAAAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Capsular Polysaccharide Biosynthesis

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MIRPTKTPISFNKLILLTTSLVSSSCYAYLTPKPHIGPAGVEYQSNVAVDYGYDDNVNYQSDHTPHVQSDFFNVKPFVQL
KGVHNADVYTLQYTGDYRQYQENNTSDDYYDHHIAFIGAWKKGLNNDLLFTIENTIGHENRGEGLTDGLSAEQFQKYGIT
DVLETNMFHTELRYSIDKQDSIGKLSFAVQYKDFTYDDRTSNFTSGSIYNFNQYIEEQEWDQTTFTIELFDQASSRTRFR
YSIVSNLRHYKINNLKDTNETFFIAGIKTIRTGKTTIDANIAWLYKDFPNNPDSESFGGLNWDIDIKWSPVRHSSFHFYT
DQSVEDPTEIGGYVLNTEYGTNWEHFWWSSRLSTTLGYHYKTSADKDKSSDKVETKTEAIAKITYKFRPSIQFELSYQQL
VNESNKEFDDFTINSVETVTQTLGYDKSLIMFTTKVQI

Sequences:

>Translated_438_residues
MIRPTKTPISFNKLILLTTSLVSSSCYAYLTPKPHIGPAGVEYQSNVAVDYGYDDNVNYQSDHTPHVQSDFFNVKPFVQL
KGVHNADVYTLQYTGDYRQYQENNTSDDYYDHHIAFIGAWKKGLNNDLLFTIENTIGHENRGEGLTDGLSAEQFQKYGIT
DVLETNMFHTELRYSIDKQDSIGKLSFAVQYKDFTYDDRTSNFTSGSIYNFNQYIEEQEWDQTTFTIELFDQASSRTRFR
YSIVSNLRHYKINNLKDTNETFFIAGIKTIRTGKTTIDANIAWLYKDFPNNPDSESFGGLNWDIDIKWSPVRHSSFHFYT
DQSVEDPTEIGGYVLNTEYGTNWEHFWWSSRLSTTLGYHYKTSADKDKSSDKVETKTEAIAKITYKFRPSIQFELSYQQL
VNESNKEFDDFTINSVETVTQTLGYDKSLIMFTTKVQI
>Mature_438_residues
MIRPTKTPISFNKLILLTTSLVSSSCYAYLTPKPHIGPAGVEYQSNVAVDYGYDDNVNYQSDHTPHVQSDFFNVKPFVQL
KGVHNADVYTLQYTGDYRQYQENNTSDDYYDHHIAFIGAWKKGLNNDLLFTIENTIGHENRGEGLTDGLSAEQFQKYGIT
DVLETNMFHTELRYSIDKQDSIGKLSFAVQYKDFTYDDRTSNFTSGSIYNFNQYIEEQEWDQTTFTIELFDQASSRTRFR
YSIVSNLRHYKINNLKDTNETFFIAGIKTIRTGKTTIDANIAWLYKDFPNNPDSESFGGLNWDIDIKWSPVRHSSFHFYT
DQSVEDPTEIGGYVLNTEYGTNWEHFWWSSRLSTTLGYHYKTSADKDKSSDKVETKTEAIAKITYKFRPSIQFELSYQQL
VNESNKEFDDFTINSVETVTQTLGYDKSLIMFTTKVQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50742; Mature: 50742

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPTKTPISFNKLILLTTSLVSSSCYAYLTPKPHIGPAGVEYQSNVAVDYGYDDNVNYQ
CCCCCCCCCCCCEEEEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC
SDHTPHVQSDFFNVKPFVQLKGVHNADVYTLQYTGDYRQYQENNTSDDYYDHHIAFIGAW
CCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEEEEEH
KKGLNNDLLFTIENTIGHENRGEGLTDGLSAEQFQKYGITDVLETNMFHTELRYSIDKQD
HHCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCEEEEEEEECCCCC
SIGKLSFAVQYKDFTYDDRTSNFTSGSIYNFNQYIEEQEWDQTTFTIELFDQASSRTRFR
CCCEEEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEEEEEECCCCCCCEEE
YSIVSNLRHYKINNLKDTNETFFIAGIKTIRTGKTTIDANIAWLYKDFPNNPDSESFGGL
EHHHHCCCEEEECCCCCCCCEEEEEEEEEEECCCEEEECEEEEEEECCCCCCCCCCCCCE
NWDIDIKWSPVRHSSFHFYTDQSVEDPTEIGGYVLNTEYGTNWEHFWWSSRLSTTLGYHY
EEEEEEEECCCCCCCEEEEECCCCCCHHHHCCEEEECCCCCCCCEEEECCHHHHHHCEEE
KTSADKDKSSDKVETKTEAIAKITYKFRPSIQFELSYQQLVNESNKEFDDFTINSVETVT
ECCCCCCCCCCCHHHHHHHEEEEEEEECCCEEEEEEHHHHHCCCCCCCCCEECCHHHHHH
QTLGYDKSLIMFTTKVQI
HHHCCCCEEEEEEEEECC
>Mature Secondary Structure
MIRPTKTPISFNKLILLTTSLVSSSCYAYLTPKPHIGPAGVEYQSNVAVDYGYDDNVNYQ
CCCCCCCCCCCCEEEEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC
SDHTPHVQSDFFNVKPFVQLKGVHNADVYTLQYTGDYRQYQENNTSDDYYDHHIAFIGAW
CCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEEEEEH
KKGLNNDLLFTIENTIGHENRGEGLTDGLSAEQFQKYGITDVLETNMFHTELRYSIDKQD
HHCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCEEEEEEEECCCCC
SIGKLSFAVQYKDFTYDDRTSNFTSGSIYNFNQYIEEQEWDQTTFTIELFDQASSRTRFR
CCCEEEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEEEEEECCCCCCCEEE
YSIVSNLRHYKINNLKDTNETFFIAGIKTIRTGKTTIDANIAWLYKDFPNNPDSESFGGL
EHHHHCCCEEEECCCCCCCCEEEEEEEEEEECCCEEEECEEEEEEECCCCCCCCCCCCCE
NWDIDIKWSPVRHSSFHFYTDQSVEDPTEIGGYVLNTEYGTNWEHFWWSSRLSTTLGYHY
EEEEEEEECCCCCCCEEEEECCCCCCHHHHCCEEEECCCCCCCCEEEECCHHHHHHCEEE
KTSADKDKSSDKVETKTEAIAKITYKFRPSIQFELSYQQLVNESNKEFDDFTINSVETVT
ECCCCCCCCCCCHHHHHHHEEEEEEEECCCEEEEEEHHHHHCCCCCCCCCEECCHHHHHH
QTLGYDKSLIMFTTKVQI
HHHCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA