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The map label for this gene is 59710933

Identifier: 59710933

GI number: 59710933

Start: 336051

End: 337310

Strand: Reverse

Name: 59710933

Synonym: VF_0326

Alternate gene names: NA

Gene position: 337310-336051 (Counterclockwise)

Preceding gene: 59710934

Following gene: 59710932

Centisome position: 11.64

GC content: 37.94

Gene sequence:

>1260_bases
ATGATAGGCATTACAAAATTAGCCTGGAAAAGTCTAATTAATCGTAAAACAACTGTATTACTTACTGTTGCAACTATTGC
TATTTCGGTAATGCTATTGGTCGGTGTAGAACGCATTCGTACAGAAGCTAAGAATAGTTTTGCGAACACGATTTCGAATA
CTGATTTGATTGTTGGTGCTCGTTCTGGTCAAGTTAACCTACTGCTTTATTCTGTTTTTAGAATAGGTAATGCGACAAAT
AATATTGATTGGAAAAGCTATCAAGAAATCATTCATCAAAGAGCAGTAAAGTGGGCTATTCCGATTTCTCTAGGTGATTC
CCATAAAGGTTTCCGTGTCATGGGGACGAATCAAGACTATTTTCGTTTTTATCAATATGGAAAAAAACAGCCTCTTGAGT
TTAAAGAAGGCAAATCATTTAATGGATTATTTGATGTCGTATTAGGTGCTGATGTTGCTAATAAACTCAATTATCATTTA
GGGGATAAATTGGTTATTGCGCACGGGATCAGTGATAAGTCTTTTACCAGACACGATAATTTACCTTTTACTGTCGTAGG
TATTTTAAAACCAACAGGAACACCTGTAGATAAAACCCTACATGTTTCACTAGAAGCAATATCAGCCATTCATGTAGGCT
GGGAAAGCGGTGCGCATTTAGGCAATACTCCAGATGCAAAAGTCTTAGAAAAGCAAAAATTTGAACCTGCAGAAATCACA
GCTTTCATGCTTGGATTAAAATCAAAGATTCAAACCTTTGCTCTACAACGCTACATTAATGAATATTCAAAAGAACCACT
TAGTGCCATTCTTCCAGGTATCGCATTACATGAATTATGGGGAATGATGTCTGTGGCAGAGCAAGCGCTCTTAGCCGTAT
CTGTTTTTGTTGTTGCCGCGGGCTTAATGGGAATGCTAACAAGCCTATTAACTAGCTTGCAAGAGCGCCGTAGAGAAATG
GCTATCTTGCGTGCAATGGGGGCTCAACCTAAGCATATTTTTATCTTATTGATTAGTGAAGCTGTTGTAATAACCAGCTT
TGGGATCATAGTAGGCCTAATGGGGCTTTACTTATCTCTCAGTATTCTACAACCTATAATCCAACAATATTATGGCATTG
CCATTGAGTTAACCCTACCAACACTTTATGAGCTCAAGCTACTTGGTCTTGTTTTGTGCTCAGGCTTTGTGATTGGCGTT
ATTCCAGCAATACAAGCTTACCGACACTCTTTAAGTGATGGCATGACAATAAGGTTATAA

Upstream 100 bases:

>100_bases
GTAACGCGAGTTTACTTTTTGTCAGCCATGACCCAAGTTTAGAGTCTTTATTCGATCAAAGTATTGATTTAAGAGAATTG
AATAAAGCAGGAGGCATCTC

Downstream 100 bases:

>100_bases
GGACCCTTTTAATGAAAAAGAAAATAATTATCTGCCTATTAATGCTGATGCCTTTTAGTGCATTCAGTAATGAGGTACTA
AAACTTGATTGGATTGATTT

Product: permease

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Efflux Transporter Permease Protein; ABC Transporter Permease; ABC-Type Transport System Permease Component; Peptide ABC Transporter Permease Component; Transmembrane Protein; ABC Transporter Membrane Protein; Permease Component Protein; ABC Transporter Permease Protein; ABC Transport System Permease Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Transporter Transmembrane Permease; ABC-Type Transport System Permease

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MIGITKLAWKSLINRKTTVLLTVATIAISVMLLVGVERIRTEAKNSFANTISNTDLIVGARSGQVNLLLYSVFRIGNATN
NIDWKSYQEIIHQRAVKWAIPISLGDSHKGFRVMGTNQDYFRFYQYGKKQPLEFKEGKSFNGLFDVVLGADVANKLNYHL
GDKLVIAHGISDKSFTRHDNLPFTVVGILKPTGTPVDKTLHVSLEAISAIHVGWESGAHLGNTPDAKVLEKQKFEPAEIT
AFMLGLKSKIQTFALQRYINEYSKEPLSAILPGIALHELWGMMSVAEQALLAVSVFVVAAGLMGMLTSLLTSLQERRREM
AILRAMGAQPKHIFILLISEAVVITSFGIIVGLMGLYLSLSILQPIIQQYYGIAIELTLPTLYELKLLGLVLCSGFVIGV
IPAIQAYRHSLSDGMTIRL

Sequences:

>Translated_419_residues
MIGITKLAWKSLINRKTTVLLTVATIAISVMLLVGVERIRTEAKNSFANTISNTDLIVGARSGQVNLLLYSVFRIGNATN
NIDWKSYQEIIHQRAVKWAIPISLGDSHKGFRVMGTNQDYFRFYQYGKKQPLEFKEGKSFNGLFDVVLGADVANKLNYHL
GDKLVIAHGISDKSFTRHDNLPFTVVGILKPTGTPVDKTLHVSLEAISAIHVGWESGAHLGNTPDAKVLEKQKFEPAEIT
AFMLGLKSKIQTFALQRYINEYSKEPLSAILPGIALHELWGMMSVAEQALLAVSVFVVAAGLMGMLTSLLTSLQERRREM
AILRAMGAQPKHIFILLISEAVVITSFGIIVGLMGLYLSLSILQPIIQQYYGIAIELTLPTLYELKLLGLVLCSGFVIGV
IPAIQAYRHSLSDGMTIRL
>Mature_419_residues
MIGITKLAWKSLINRKTTVLLTVATIAISVMLLVGVERIRTEAKNSFANTISNTDLIVGARSGQVNLLLYSVFRIGNATN
NIDWKSYQEIIHQRAVKWAIPISLGDSHKGFRVMGTNQDYFRFYQYGKKQPLEFKEGKSFNGLFDVVLGADVANKLNYHL
GDKLVIAHGISDKSFTRHDNLPFTVVGILKPTGTPVDKTLHVSLEAISAIHVGWESGAHLGNTPDAKVLEKQKFEPAEIT
AFMLGLKSKIQTFALQRYINEYSKEPLSAILPGIALHELWGMMSVAEQALLAVSVFVVAAGLMGMLTSLLTSLQERRREM
AILRAMGAQPKHIFILLISEAVVITSFGIIVGLMGLYLSLSILQPIIQQYYGIAIELTLPTLYELKLLGLVLCSGFVIGV
IPAIQAYRHSLSDGMTIRL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46196; Mature: 46196

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00358 RIBOSOMAL_L5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGITKLAWKSLINRKTTVLLTVATIAISVMLLVGVERIRTEAKNSFANTISNTDLIVGA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
RSGQVNLLLYSVFRIGNATNNIDWKSYQEIIHQRAVKWAIPISLGDSHKGFRVMGTNQDY
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCHHH
FRFYQYGKKQPLEFKEGKSFNGLFDVVLGADVANKLNYHLGDKLVIAHGISDKSFTRHDN
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
LPFTVVGILKPTGTPVDKTLHVSLEAISAIHVGWESGAHLGNTPDAKVLEKQKFEPAEIT
CCEEEEEEECCCCCCCCCEEEEHHHHHHHHEECCCCCCCCCCCCCHHHHHHCCCCHHHHH
AFMLGLKSKIQTFALQRYINEYSKEPLSAILPGIALHELWGMMSVAEQALLAVSVFVVAA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMGMLTSLLTSLQERRREMAILRAMGAQPKHIFILLISEAVVITSFGIIVGLMGLYLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
SILQPIIQQYYGIAIELTLPTLYELKLLGLVLCSGFVIGVIPAIQAYRHSLSDGMTIRL
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MIGITKLAWKSLINRKTTVLLTVATIAISVMLLVGVERIRTEAKNSFANTISNTDLIVGA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
RSGQVNLLLYSVFRIGNATNNIDWKSYQEIIHQRAVKWAIPISLGDSHKGFRVMGTNQDY
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCHHH
FRFYQYGKKQPLEFKEGKSFNGLFDVVLGADVANKLNYHLGDKLVIAHGISDKSFTRHDN
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
LPFTVVGILKPTGTPVDKTLHVSLEAISAIHVGWESGAHLGNTPDAKVLEKQKFEPAEIT
CCEEEEEEECCCCCCCCCEEEEHHHHHHHHEECCCCCCCCCCCCCHHHHHHCCCCHHHHH
AFMLGLKSKIQTFALQRYINEYSKEPLSAILPGIALHELWGMMSVAEQALLAVSVFVVAA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMGMLTSLLTSLQERRREMAILRAMGAQPKHIFILLISEAVVITSFGIIVGLMGLYLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
SILQPIIQQYYGIAIELTLPTLYELKLLGLVLCSGFVIGVIPAIQAYRHSLSDGMTIRL
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA