| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710915
Identifier: 59710915
GI number: 59710915
Start: 317421
End: 318122
Strand: Direct
Name: 59710915
Synonym: VF_0308
Alternate gene names: NA
Gene position: 317421-318122 (Clockwise)
Preceding gene: 59710914
Following gene: 59710916
Centisome position: 10.95
GC content: 38.6
Gene sequence:
>702_bases ATGAACAAACTATCCCTCGCCACTGTTGTTGCTTCTGCTGCCTTAGTTATGGCAGTACCTGCACATTCAGCAGAGAAGGA ATTTACAACTAAAGTTGCTATTGATGCGTGGTTCCCTGATGGAAAAGTTGGTTCTAAAGATGGAGCAGTAAGAGATAATG ATGTTGATGCATCACAAGCTTTCTCTATTGCGTTTGAACATCCATACCCAATTTTACCTAATGTAAAAGTACGTTATACA CCAGTAAAAGCGGATCGTTTTGAATACGATCAAATTGACTACACCGGTTACTATAAATTATTAGAAACTGATGGTCTGCA ATTTGATGTGGGTTTAACACTAACTCAATTTGCAAACGGTGAATTTAATAAAGGTGGTTCTGTTTCTACTGACCCTGCCC AACCTGCAAACCAGAGTTTTAGCGAAACAGCAATAAACATGTATGCTGATGCATCGATGCACATTCCAAATACAAACTTC CATATTTTTGGTCAGTATGATTTTGGTAGCAGTAGTGATACTCGTACAATGGATGGTCAAGCTGGTGTGAAATACATTCT TCCTGTTGATGCTGTCGATGTTGAATTTAAACTTGGTTATCGTGTAATGGATCATGAGTTTGGTTATTTTGAAGGCTTTG ATAGTGACCAAGCAAACGTCATGGTTGATGGCTGGTTTGGTGGTTTGTCGTTTGATTTCTAA
Upstream 100 bases:
>100_bases ATAAATTAAGTTAGATACGTAAAAGAAGAGTATATAAATAAACCAAATCGTTTATTATTACTTCATATGAACCAAATAGC GTCGCAAATGGAGACTACGC
Downstream 100 bases:
>100_bases TCGATAAAAACTGTATCAACAATAACGAATTATTTTTAAGGTAGCGATTCAGGTGACTGAGTCGCTATTTTTTTATTTTA AATTTGCTCAAATTACGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNKLSLATVVASAALVMAVPAHSAEKEFTTKVAIDAWFPDGKVGSKDGAVRDNDVDASQAFSIAFEHPYPILPNVKVRYT PVKADRFEYDQIDYTGYYKLLETDGLQFDVGLTLTQFANGEFNKGGSVSTDPAQPANQSFSETAINMYADASMHIPNTNF HIFGQYDFGSSSDTRTMDGQAGVKYILPVDAVDVEFKLGYRVMDHEFGYFEGFDSDQANVMVDGWFGGLSFDF
Sequences:
>Translated_233_residues MNKLSLATVVASAALVMAVPAHSAEKEFTTKVAIDAWFPDGKVGSKDGAVRDNDVDASQAFSIAFEHPYPILPNVKVRYT PVKADRFEYDQIDYTGYYKLLETDGLQFDVGLTLTQFANGEFNKGGSVSTDPAQPANQSFSETAINMYADASMHIPNTNF HIFGQYDFGSSSDTRTMDGQAGVKYILPVDAVDVEFKLGYRVMDHEFGYFEGFDSDQANVMVDGWFGGLSFDF >Mature_233_residues MNKLSLATVVASAALVMAVPAHSAEKEFTTKVAIDAWFPDGKVGSKDGAVRDNDVDASQAFSIAFEHPYPILPNVKVRYT PVKADRFEYDQIDYTGYYKLLETDGLQFDVGLTLTQFANGEFNKGGSVSTDPAQPANQSFSETAINMYADASMHIPNTNF HIFGQYDFGSSSDTRTMDGQAGVKYILPVDAVDVEFKLGYRVMDHEFGYFEGFDSDQANVMVDGWFGGLSFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25653; Mature: 25653
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLSLATVVASAALVMAVPAHSAEKEFTTKVAIDAWFPDGKVGSKDGAVRDNDVDASQA CCCHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCE FSIAFEHPYPILPNVKVRYTPVKADRFEYDQIDYTGYYKLLETDGLQFDVGLTLTQFANG EEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECEEEEEECCC EFNKGGSVSTDPAQPANQSFSETAINMYADASMHIPNTNFHIFGQYDFGSSSDTRTMDGQ CCCCCCCCCCCCCCCCCCCHHHHEEEEEECCEEECCCCCEEEEEEECCCCCCCCEEECCC AGVKYILPVDAVDVEFKLGYRVMDHEFGYFEGFDSDQANVMVDGWFGGLSFDF CCEEEEEECCEEEEEEEECEEEECCCCCCCCCCCCCCCCEEEEEEECCEEECC >Mature Secondary Structure MNKLSLATVVASAALVMAVPAHSAEKEFTTKVAIDAWFPDGKVGSKDGAVRDNDVDASQA CCCHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCE FSIAFEHPYPILPNVKVRYTPVKADRFEYDQIDYTGYYKLLETDGLQFDVGLTLTQFANG EEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECEEEEEECCC EFNKGGSVSTDPAQPANQSFSETAINMYADASMHIPNTNFHIFGQYDFGSSSDTRTMDGQ CCCCCCCCCCCCCCCCCCCHHHHEEEEEECCEEECCCCCEEEEEEECCCCCCCCEEECCC AGVKYILPVDAVDVEFKLGYRVMDHEFGYFEGFDSDQANVMVDGWFGGLSFDF CCEEEEEECCEEEEEEEECEEEECCCCCCCCCCCCCCCCEEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA