| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617472
Identifier: 58617472
GI number: 58617472
Start: 1186288
End: 1186806
Strand: Reverse
Name: 58617472
Synonym: ERGA_CDS_07450
Alternate gene names: NA
Gene position: 1186806-1186288 (Counterclockwise)
Preceding gene: 58617474
Following gene: 58617471
Centisome position: 79.12
GC content: 38.73
Gene sequence:
>519_bases ATGCCGTATAGAGATTTTGCTATAACTTGGTTAGCTATATTGATAGCGTGTATCATAACGATATGTGTATTAATACATGT GCTATGTAGGTATGCGTGTCCTGATCTCAAAACACGTATAGAACGGGAAAAAAAAGCACAGGCAAAAATGGATAAGTTAC TTGCTAAGCAAAACAAGTCATTAGTTAATAATAAACAAGAAGAAAAGAGTGAAAAAGAGCCTGATAGATTGTCAGAAGAT GGTGCTCAGCCATTAGGATGCCAGTGTTCAAATCCCGATAAATTGAATGATGATTCTGTAAAGTTGTTAGAGGAACAACA AGATCAACCACAGAGTAAACGGCTACCACAACCTGTGTCTAGCACTTCTGTAGTTGAACAAGGTGAGACAGGTCAAGTTG AGTCTACAATAGAAGGATTACATCCTACTAGTTCACCGTGTTGTCGAAGACGGGCTCCAACGTCTGTAGTTAGTAATGTT ATCATTGAGCAACAGGGTAATAGCCAAGGTAAGGAGTAG
Upstream 100 bases:
>100_bases TGTACAACTATTCCTACATTATATTAATTACCTATAGGGTTATTGATTTTTCATATTATTGTGTGATATACTCCCATGTG TTACTGATTAATGGTGTGTT
Downstream 100 bases:
>100_bases TTTTGACAGGTGGGTTATTTTAGTAAAGGAGAATCAGTTGTTGACAGTTAGAGATATATCTGTTGTGAAAGATAGAAAAT GTGTTAGAAAAGAATTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPYRDFAITWLAILIACIITICVLIHVLCRYACPDLKTRIEREKKAQAKMDKLLAKQNKSLVNNKQEEKSEKEPDRLSED GAQPLGCQCSNPDKLNDDSVKLLEEQQDQPQSKRLPQPVSSTSVVEQGETGQVESTIEGLHPTSSPCCRRRAPTSVVSNV IIEQQGNSQGKE
Sequences:
>Translated_172_residues MPYRDFAITWLAILIACIITICVLIHVLCRYACPDLKTRIEREKKAQAKMDKLLAKQNKSLVNNKQEEKSEKEPDRLSED GAQPLGCQCSNPDKLNDDSVKLLEEQQDQPQSKRLPQPVSSTSVVEQGETGQVESTIEGLHPTSSPCCRRRAPTSVVSNV IIEQQGNSQGKE >Mature_171_residues PYRDFAITWLAILIACIITICVLIHVLCRYACPDLKTRIEREKKAQAKMDKLLAKQNKSLVNNKQEEKSEKEPDRLSEDG AQPLGCQCSNPDKLNDDSVKLLEEQQDQPQSKRLPQPVSSTSVVEQGETGQVESTIEGLHPTSSPCCRRRAPTSVVSNVI IEQQGNSQGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19188; Mature: 19057
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYRDFAITWLAILIACIITICVLIHVLCRYACPDLKTRIEREKKAQAKMDKLLAKQNKS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVNNKQEEKSEKEPDRLSEDGAQPLGCQCSNPDKLNDDSVKLLEEQQDQPQSKRLPQPVS HHCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCC STSVVEQGETGQVESTIEGLHPTSSPCCRRRAPTSVVSNVIIEQQGNSQGKE HHHHHHCCCCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PYRDFAITWLAILIACIITICVLIHVLCRYACPDLKTRIEREKKAQAKMDKLLAKQNKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVNNKQEEKSEKEPDRLSEDGAQPLGCQCSNPDKLNDDSVKLLEEQQDQPQSKRLPQPVS HHCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCC STSVVEQGETGQVESTIEGLHPTSSPCCRRRAPTSVVSNVIIEQQGNSQGKE HHHHHHCCCCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA