| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is cyaY
Identifier: 58617437
GI number: 58617437
Start: 1129904
End: 1130233
Strand: Reverse
Name: cyaY
Synonym: ERGA_CDS_07100
Alternate gene names: NA
Gene position: 1130233-1129904 (Counterclockwise)
Preceding gene: 58617438
Following gene: 58617436
Centisome position: 75.35
GC content: 30.91
Gene sequence:
>330_bases ATGCCACATTTTTTGTGTGTGTCTGATTTTCAAAGCTTGTCTTATAATGTATTAGATACTTTAGTGAATATGATAGATGC TGCAGATTTAGATGGGGTATTGGAATGTGAAAATTGTAATGGGGTAGTTAGCATATCTGATGGTAAAGGTAATGTATATA TTGTTAGCAAACATGAGCCTTCTTTGCAGATTTGGGTTGCTTCACCTATTAGTGGATCTGTCCGTTTCAGTTATAATAAA TCTCTAAATATTTGGGTTAATAATAACAACGATGAGCTATTTCACTTCTTAAAGTCTGAAATTAATATGTTATTTAATGT TATGATATAG
Upstream 100 bases:
>100_bases GTGGATAGGTTTATTTGTTATTTTTAAGATTCTGTAGTAAGGTTCATACTTGTTGAAGTGCATGTATTTTTATTTGACAT AATGTTGCGAGGAAGTATAA
Downstream 100 bases:
>100_bases AAGATGAAAATATTATTTCAATTTGTCAAGCCTTACCTGTTATACTTTATATTTGCGTATTTAGTAGTTGCTGTTTCCTC TGTTACAATTTTGGCATTTG
Product: putative CyaY protein
Products: NA
Alternate protein names: Frataxin-Like Domain-Containing Protein
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MPHFLCVSDFQSLSYNVLDTLVNMIDAADLDGVLECENCNGVVSISDGKGNVYIVSKHEPSLQIWVASPISGSVRFSYNK SLNIWVNNNNDELFHFLKSEINMLFNVMI
Sequences:
>Translated_109_residues MPHFLCVSDFQSLSYNVLDTLVNMIDAADLDGVLECENCNGVVSISDGKGNVYIVSKHEPSLQIWVASPISGSVRFSYNK SLNIWVNNNNDELFHFLKSEINMLFNVMI >Mature_108_residues PHFLCVSDFQSLSYNVLDTLVNMIDAADLDGVLECENCNGVVSISDGKGNVYIVSKHEPSLQIWVASPISGSVRFSYNKS LNIWVNNNNDELFHFLKSEINMLFNVMI
Specific function: Unknown
COG id: COG1965
COG function: function code P; Protein implicated in iron transport, frataxin homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12231; Mature: 12100
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS01344 FRATAXIN_1 ; PS50810 FRATAXIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFLCVSDFQSLSYNVLDTLVNMIDAADLDGVLECENCNGVVSISDGKGNVYIVSKHEP CCCEEEECCHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCC SLQIWVASPISGSVRFSYNKSLNIWVNNNNDELFHFLKSEINMLFNVMI CEEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHEEECC >Mature Secondary Structure PHFLCVSDFQSLSYNVLDTLVNMIDAADLDGVLECENCNGVVSISDGKGNVYIVSKHEP CCEEEECCHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCC SLQIWVASPISGSVRFSYNKSLNIWVNNNNDELFHFLKSEINMLFNVMI CEEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA