| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617370
Identifier: 58617370
GI number: 58617370
Start: 1009599
End: 1010474
Strand: Reverse
Name: 58617370
Synonym: ERGA_CDS_06430
Alternate gene names: NA
Gene position: 1010474-1009599 (Counterclockwise)
Preceding gene: 58617371
Following gene: 58617369
Centisome position: 67.37
GC content: 30.48
Gene sequence:
>876_bases TTGATTTATGGAGTTGTTGTGAATGCTAAAGAATTTAGTGATAAAAATCTAGCATATGTTAGTGGTTTATCAATAATATT TTCTACGATTATTTATGTCTTGTTATTATTTTCTGGCATATATTATGGGAATTTTATAGTTGTGTTACCAATGTCTTTAA TTGCGTTAGTTTCTACAGTAATTATTCCGAGTGGTTTTTTTGTAAACAATCCAAATGAAGCTAAGGTTGTTGAATTTTTT GGGAATTATATTGGTACTATATTTCAATCAGGGTTTTTCTGGACTGTTCCATTTGTGCGTATGAGAACAATCTCATTAAA AGTTCGAAATATTAATACAAGTAAAATTAAAGTGAATGATTTTAATGGAAATCCAATAGAAATAGCTGCTGTAATTGTCT GGAAAGTAGTTAGTCCTGCAAAAGCGTGTCTTAATGTAGGTGATTATCAGGAGTTTATTAATATTCAAAGTGAAACTGCA GTCAGGGAGTTAGCTGGTAGCTATCCATATGATGCTGAAGATGATAGTGAGTCTTTGCGTAATAATTCTATGCAAATATC ATCTAAGCTGCGTGATATATTACAAAGTAGATTAGATGTTGTGGGAATTATTATAGAAGATGCTCGTATTGCACATTTAG CTTATTCTTCTGAAATAGCACAACTTATGTTAAGAAGACAACAAGCGAAAGCTATTACTAATGCTAGAGGATACATAGTG CGAAATGCTATTACTATGGTGGATGAAATATTAACACATTTTGAGTTAAAATATCAAATTAATTTATCTGATGAACAGAA AGTTAAGTTGATAAATAATCTGTTAGTATCTCTGATTTCAGAGCAAGGTGCTCAGCCTACTCTTAATATAGAATAA
Upstream 100 bases:
>100_bases TTTTGTATTGTTGAATTAATTGTAAGATCTTAATAGTGAAATAATGGTTGTTTATGATTGGGTGTTTGTTATTTTATCTA TGAGGTTTTCTAGTAGGTAG
Downstream 100 bases:
>100_bases TGCTTAATAGTATAAAAAGGTGGAGGCCTTTTTTTAAGAACTGTGGGCAAAATATCTTCTTATAGTTGTGAAAATTTGTA TAGAGTATTTATTTGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MIYGVVVNAKEFSDKNLAYVSGLSIIFSTIIYVLLLFSGIYYGNFIVVLPMSLIALVSTVIIPSGFFVNNPNEAKVVEFF GNYIGTIFQSGFFWTVPFVRMRTISLKVRNINTSKIKVNDFNGNPIEIAAVIVWKVVSPAKACLNVGDYQEFINIQSETA VRELAGSYPYDAEDDSESLRNNSMQISSKLRDILQSRLDVVGIIIEDARIAHLAYSSEIAQLMLRRQQAKAITNARGYIV RNAITMVDEILTHFELKYQINLSDEQKVKLINNLLVSLISEQGAQPTLNIE
Sequences:
>Translated_291_residues MIYGVVVNAKEFSDKNLAYVSGLSIIFSTIIYVLLLFSGIYYGNFIVVLPMSLIALVSTVIIPSGFFVNNPNEAKVVEFF GNYIGTIFQSGFFWTVPFVRMRTISLKVRNINTSKIKVNDFNGNPIEIAAVIVWKVVSPAKACLNVGDYQEFINIQSETA VRELAGSYPYDAEDDSESLRNNSMQISSKLRDILQSRLDVVGIIIEDARIAHLAYSSEIAQLMLRRQQAKAITNARGYIV RNAITMVDEILTHFELKYQINLSDEQKVKLINNLLVSLISEQGAQPTLNIE >Mature_291_residues MIYGVVVNAKEFSDKNLAYVSGLSIIFSTIIYVLLLFSGIYYGNFIVVLPMSLIALVSTVIIPSGFFVNNPNEAKVVEFF GNYIGTIFQSGFFWTVPFVRMRTISLKVRNINTSKIKVNDFNGNPIEIAAVIVWKVVSPAKACLNVGDYQEFINIQSETA VRELAGSYPYDAEDDSESLRNNSMQISSKLRDILQSRLDVVGIIIEDARIAHLAYSSEIAQLMLRRQQAKAITNARGYIV RNAITMVDEILTHFELKYQINLSDEQKVKLINNLLVSLISEQGAQPTLNIE
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32606; Mature: 32606
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYGVVVNAKEFSDKNLAYVSGLSIIFSTIIYVLLLFSGIYYGNFIVVLPMSLIALVSTV CEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IIPSGFFVNNPNEAKVVEFFGNYIGTIFQSGFFWTVPFVRMRTISLKVRNINTSKIKVND HHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHEEEEEEEEEEECCCCEEEEEC FNGNPIEIAAVIVWKVVSPAKACLNVGDYQEFINIQSETAVRELAGSYPYDAEDDSESLR CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH NNSMQISSKLRDILQSRLDVVGIIIEDARIAHLAYSSEIAQLMLRRQQAKAITNARGYIV CCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RNAITMVDEILTHFELKYQINLSDEQKVKLINNLLVSLISEQGAQPTLNIE HHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIYGVVVNAKEFSDKNLAYVSGLSIIFSTIIYVLLLFSGIYYGNFIVVLPMSLIALVSTV CEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IIPSGFFVNNPNEAKVVEFFGNYIGTIFQSGFFWTVPFVRMRTISLKVRNINTSKIKVND HHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHEEEEEEEEEEECCCCEEEEEC FNGNPIEIAAVIVWKVVSPAKACLNVGDYQEFINIQSETAVRELAGSYPYDAEDDSESLR CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH NNSMQISSKLRDILQSRLDVVGIIIEDARIAHLAYSSEIAQLMLRRQQAKAITNARGYIV CCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RNAITMVDEILTHFELKYQINLSDEQKVKLINNLLVSLISEQGAQPTLNIE HHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA