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The map label for this gene is yfhC [C]

Identifier: 58617315

GI number: 58617315

Start: 957469

End: 957906

Strand: Reverse

Name: yfhC [C]

Synonym: ERGA_CDS_05880

Alternate gene names: 58617315

Gene position: 957906-957469 (Counterclockwise)

Preceding gene: 58617316

Following gene: 58617313

Centisome position: 63.86

GC content: 33.56

Gene sequence:

>438_bases
GTGTTTAATTACTCATACATGAGATTAGCTATTGGTAAAGCACAGGAAGATTGTTTGGAGGTACCAGTTGGTGCAGTAAT
AGTGTATAATGGTAAAGTAATATCTTGTCAAAGCAACTCAAATATAAAGAATTGTGATCCTACTGCACATGCAGAAATTC
TATCTATAAGGCATGCTTGTATTGTATTGTCTACTCATATATTAAACCAATGTGATATGTATGTAACTTTAGAACCATGT
GCAATGTGTGCTCAAGCAATATCCTTTGCGAGAATACGTAGATTGTATTTTGGAGCATATAATAAAAAATATGGTGGTAT
TGAAAATGGTGCTAGAGTTTTTCACTTCTGTCATAGTGTTCCAGAGGTATATGGAGGAATATTAGAAGAAGAAAACATTA
GGCTGATGACTGACTTTTTTAAAAGACTCAGGGAATAG

Upstream 100 bases:

>100_bases
ATATAACAAAAATAGTAAGCTCTATTGAAAAAATAAAATACATATATATTAAGAAATGGTTTTTATTGTATAATAATAAT
TTTAATTCACGATAAATTCA

Downstream 100 bases:

>100_bases
TATATTGTTATGTTAGTTATAATGGTTGTACCTATTAGGTTATATTTGTTTACCTAATAAAGTAAAGCTTGATGAGTTGA
ATCTTCAAAAATATGGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MFNYSYMRLAIGKAQEDCLEVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHACIVLSTHILNQCDMYVTLEPC
AMCAQAISFARIRRLYFGAYNKKYGGIENGARVFHFCHSVPEVYGGILEEENIRLMTDFFKRLRE

Sequences:

>Translated_145_residues
MFNYSYMRLAIGKAQEDCLEVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHACIVLSTHILNQCDMYVTLEPC
AMCAQAISFARIRRLYFGAYNKKYGGIENGARVFHFCHSVPEVYGGILEEENIRLMTDFFKRLRE
>Mature_145_residues
MFNYSYMRLAIGKAQEDCLEVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHACIVLSTHILNQCDMYVTLEPC
AMCAQAISFARIRRLYFGAYNKKYGGIENGARVFHFCHSVPEVYGGILEEENIRLMTDFFKRLRE

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=150, Percent_Identity=42.6666666666667, Blast_Score=107, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17554608, Length=113, Percent_Identity=38.0530973451327, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17541138, Length=148, Percent_Identity=31.7567567567568, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17555996, Length=95, Percent_Identity=36.8421052631579, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322425, Length=162, Percent_Identity=31.4814814814815, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16436; Mature: 16436

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNYSYMRLAIGKAQEDCLEVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHAC
CCCCHHHHEECCCCHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
IVLSTHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGIENGARVFHFCHSV
HHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
PEVYGGILEEENIRLMTDFFKRLRE
HHHHCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFNYSYMRLAIGKAQEDCLEVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHAC
CCCCHHHHEECCCCHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
IVLSTHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGIENGARVFHFCHSV
HHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
PEVYGGILEEENIRLMTDFFKRLRE
HHHHCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA