| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617279
Identifier: 58617279
GI number: 58617279
Start: 901098
End: 902075
Strand: Reverse
Name: 58617279
Synonym: ERGA_CDS_05520
Alternate gene names: NA
Gene position: 902075-901098 (Counterclockwise)
Preceding gene: 58617281
Following gene: 58617278
Centisome position: 60.14
GC content: 28.53
Gene sequence:
>978_bases ATGCAATTCATATATAAAATCAAAAGTATTATAGTCTTATGTCTTATTTCTGTGATTATACCAGACAGTCTGGTATTGGC GGATTGTATAAAATATGATCAAAAAGATATTGTAGTTGGTTTATTATCCACGAAGTTTCCTACATACCCTAATGAAGATA AGACTGCTGCAGAAATTACACAGCTATTGCAAAGCTATAGAGTACGTGTAGTATTGATGGACTATAATGTACTTATGGAA TCAGTCAAAAATGAGATTATTAAAAGAAATAAATCTTATGTTGGACAGAATTATCAAGTATCGCGTTATAGTATAATAGA AGATGTTGTTGAAGAATTTATTAAAAATAATCGTATTAATAGGATACTAATACCAGGTAATTATTATAACATTAGTTCTT TTCCTATTTCTCCATCCTTGGATAGACAATTAGTTACTAATGCTATTGTTCAAATTGTTAATAAAGATAATTGTATACAT CTTTTTGGAATATGTGGTGGATTCCAAGGTATAATGGATGCAAATGGTGTTAAAATTAGACCGGTGGACAGTATGCTTAA CTCTGAAATTTCAGTTGCATCTCATCGTATTTCAATGCCTAATCCTAGAAATGTAGATGCTAATTTACATAAGATAATAG TTTTTTCTCATAATAGATTGTCAGGTATTCTAAATGATCTTAATGATGAGTTGAATAAAAGTACACAGGTAATATATTTA CCAGATGCACATTCAGAGGCAGTTGATAATAGTATAGAAAATATTAAAAAGATATATAGTCTTGGTTATAAAATTGTTGC TTTATCAGAGGATGGTATAATAGAAGCTATAGAAGATAAATATGGTAATATATATGTTCAGTTTCACCCAGAATATCTAT TAGTTAATGTTGAGAAGAAACGTCTTAATAATGTTGGAATGGATAAATCTATTATGATTGCAGATGCGATAATTAGAGAT TTTCTTTTTCGTGATTAA
Upstream 100 bases:
>100_bases CACTTGTACAATTAGCTTCTTGTATTATCCTAAATTAGGGTAATACTGTTTGTATTTGTATCTTAGCAATGACTATACAA TTTTATAGTAGGTTATATTA
Downstream 100 bases:
>100_bases GTTATAACATATAGTATGCTATTAAGGATAGTTATTGTTTTTGAATTATAAGAAGTTCTTATGATAAGATTTGTTATGTA GTGTATTGGAATAAATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MQFIYKIKSIIVLCLISVIIPDSLVLADCIKYDQKDIVVGLLSTKFPTYPNEDKTAAEITQLLQSYRVRVVLMDYNVLME SVKNEIIKRNKSYVGQNYQVSRYSIIEDVVEEFIKNNRINRILIPGNYYNISSFPISPSLDRQLVTNAIVQIVNKDNCIH LFGICGGFQGIMDANGVKIRPVDSMLNSEISVASHRISMPNPRNVDANLHKIIVFSHNRLSGILNDLNDELNKSTQVIYL PDAHSEAVDNSIENIKKIYSLGYKIVALSEDGIIEAIEDKYGNIYVQFHPEYLLVNVEKKRLNNVGMDKSIMIADAIIRD FLFRD
Sequences:
>Translated_325_residues MQFIYKIKSIIVLCLISVIIPDSLVLADCIKYDQKDIVVGLLSTKFPTYPNEDKTAAEITQLLQSYRVRVVLMDYNVLME SVKNEIIKRNKSYVGQNYQVSRYSIIEDVVEEFIKNNRINRILIPGNYYNISSFPISPSLDRQLVTNAIVQIVNKDNCIH LFGICGGFQGIMDANGVKIRPVDSMLNSEISVASHRISMPNPRNVDANLHKIIVFSHNRLSGILNDLNDELNKSTQVIYL PDAHSEAVDNSIENIKKIYSLGYKIVALSEDGIIEAIEDKYGNIYVQFHPEYLLVNVEKKRLNNVGMDKSIMIADAIIRD FLFRD >Mature_325_residues MQFIYKIKSIIVLCLISVIIPDSLVLADCIKYDQKDIVVGLLSTKFPTYPNEDKTAAEITQLLQSYRVRVVLMDYNVLME SVKNEIIKRNKSYVGQNYQVSRYSIIEDVVEEFIKNNRINRILIPGNYYNISSFPISPSLDRQLVTNAIVQIVNKDNCIH LFGICGGFQGIMDANGVKIRPVDSMLNSEISVASHRISMPNPRNVDANLHKIIVFSHNRLSGILNDLNDELNKSTQVIYL PDAHSEAVDNSIENIKKIYSLGYKIVALSEDGIIEAIEDKYGNIYVQFHPEYLLVNVEKKRLNNVGMDKSIMIADAIIRD FLFRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36980; Mature: 36980
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFIYKIKSIIVLCLISVIIPDSLVLADCIKYDQKDIVVGLLSTKFPTYPNEDKTAAEIT CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEEEEHHCCCCCCCCCCCHHHHHH QLLQSYRVRVVLMDYNVLMESVKNEIIKRNKSYVGQNYQVSRYSIIEDVVEEFIKNNRIN HHHHHHCEEEEEEEHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC RILIPGNYYNISSFPISPSLDRQLVTNAIVQIVNKDNCIHLFGICGGFQGIMDANGVKIR EEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCEEEE PVDSMLNSEISVASHRISMPNPRNVDANLHKIIVFSHNRLSGILNDLNDELNKSTQVIYL EHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEC PDAHSEAVDNSIENIKKIYSLGYKIVALSEDGIIEAIEDKYGNIYVQFHPEYLLVNVEKK CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCEEEEEECCCEEEEEEHHH RLNNVGMDKSIMIADAIIRDFLFRD HHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFIYKIKSIIVLCLISVIIPDSLVLADCIKYDQKDIVVGLLSTKFPTYPNEDKTAAEIT CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEEEEHHCCCCCCCCCCCHHHHHH QLLQSYRVRVVLMDYNVLMESVKNEIIKRNKSYVGQNYQVSRYSIIEDVVEEFIKNNRIN HHHHHHCEEEEEEEHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC RILIPGNYYNISSFPISPSLDRQLVTNAIVQIVNKDNCIHLFGICGGFQGIMDANGVKIR EEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCEEEE PVDSMLNSEISVASHRISMPNPRNVDANLHKIIVFSHNRLSGILNDLNDELNKSTQVIYL EHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEC PDAHSEAVDNSIENIKKIYSLGYKIVALSEDGIIEAIEDKYGNIYVQFHPEYLLVNVEKK CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCEEEEEECCCEEEEEEHHH RLNNVGMDKSIMIADAIIRDFLFRD HHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA