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The map label for this gene is atpD [H]

Identifier: 58617198

GI number: 58617198

Start: 762149

End: 763696

Strand: Reverse

Name: atpD [H]

Synonym: ERGA_CDS_04710

Alternate gene names: 58617198

Gene position: 763696-762149 (Counterclockwise)

Preceding gene: 58617204

Following gene: 58617197

Centisome position: 50.92

GC content: 35.34

Gene sequence:

>1548_bases
TTGCTACGTTTTTATTGTAATGTAAGGTACAGGATGTCAAGTTTAACTGGTAAAGTAAAAGGTAGAGCTAGGAAAATTAA
AGGTGATGCAGATATTCGTGTTAATGAGTCCACTGAGAATGTTGGGTTAGTAATCCGTGTGATGACTGCAGTTGTAGATA
TTAAGTTTCCTAGTGGAAAGGTACCTAAGATACTAAATGCATTAGAAAGTAAAGAGATTTATAATGGTAAAAAATTAGTT
CTTGAGGTATCTCAGCATATTAGTGATAGTATTGTAAGGTGTATAGCACTTGATAGTACTGATGGTTTATCTAGAAATGA
TGAATTTATTGATACTGGTGCTCCTATATCTGTTCCTGTTGGTAGAGCAACTTTGGGTAGGGTTTTTGATGTATTAGGAA
ATCCAATAGATAATTGTGGTCCATTAACTAAATCAGATTACTCTATTAAGCCAATATATTCAGAAGTTCCTAAATTAACA
GATCAAAAGGTTACTACAGAAATATTGGTAACTGGTATTAAGGTAATAGATTTACTGGCGCCGTACCTTAAAGGTGGAAA
AGTTGGTTTGTTTGGAGGTGCTGGTGTAGGTAAAACTGTACTTATTATGGAGTTAATACATAATATTGCAAAAGCTCATA
AGGGGGTCTCAGTATTTGCTGGGGTAGGAGAACGTACACGTGAAGGAAATGATTTATATCATGAAATGATAGAATCTGGT
GTAATCAATTTAGAGGAAAAAGATAAGTCACAAGCAGTTTTAGTATATGGTCAGATGAATGAACCTCCTGGGGCAAGGTT
ACGTGTTGCATTATCTGCTTTAACTATGGCAGAATATTTTAGAGATGTTGAAAATCAGGATGTATTGTTTTTTGTAGATA
ACATATTTAGATTTACTCAGTCTGGTTCTGAAATTTCAGCTTTATTAGGTAGAATCCCATCTGCTGTAGGTTATCAGCCT
ACTCTTGCTGCAGAAATGGGTGCTATGCAAGAGAGAATTACTTCTACAAATCGTGGTTCTATTACTTCAGTACAAGCAAT
ATATGTGCCAGCAGATGATTTAACAGATCCAGCTCCAGCAACTTCTTTTGCTCATCTTGATTCGACAACTGTCTTGTCAA
GACAAATAGCTGAGTTGGGTATATATCCTGCTGTTGATCCTTTAGATTCAGCTTCTCAGGCGTTGTCTATTGATATTGTT
GGGGAAAAACATTATGAGGTATCTAAGGAAGTGCAGCGTATATTACAAACGTATAAGTCTTTACAAGATATTATTGCAAT
TCTTGGTATGGAGGAGTTGTCAGAAGAAGATAAGCTTATAGTGGCAAGAGCGAGGAAAATTCAGAGGTTTTTATCGCAAC
CTTTTCATGTTGCAGAGGTATTTACTGGTACACCAGGTGTATTTGTTTCTCTTGAAGACACAGTCTCTAGTTTTAAGGAT
ATAGTAGAAGGTAAGTATGATCATTTACCTGAAGCTGCATTTTATATGGTTAGTAACATAAATGAAGCTGTGAAAAAAGC
AGAGCTATTGCAAAAAGAAGGTAAATAA

Upstream 100 bases:

>100_bases
GTCCGGCTAGGGGTACTTATAAATGCATTGTTTAAGTATTGCAAGTTTTTTTTATTTTATTACAATACTGGTTAGTTTGA
GTGATCAGCTTAAGTAGTTT

Downstream 100 bases:

>100_bases
CTATGAAATGCCTTTCTGTTGAATTTGTTACTCCAGATGTTTCACTACAGATAAAAAATGTTTTATCGATTACTTCATAT
ACTGTGGATGGTGAATTTAT

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MLRFYCNVRYRMSSLTGKVKGRARKIKGDADIRVNESTENVGLVIRVMTAVVDIKFPSGKVPKILNALESKEIYNGKKLV
LEVSQHISDSIVRCIALDSTDGLSRNDEFIDTGAPISVPVGRATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLT
DQKVTTEILVTGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESG
VINLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSGSEISALLGRIPSAVGYQP
TLAAEMGAMQERITSTNRGSITSVQAIYVPADDLTDPAPATSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQALSIDIV
GEKHYEVSKEVQRILQTYKSLQDIIAILGMEELSEEDKLIVARARKIQRFLSQPFHVAEVFTGTPGVFVSLEDTVSSFKD
IVEGKYDHLPEAAFYMVSNINEAVKKAELLQKEGK

Sequences:

>Translated_515_residues
MLRFYCNVRYRMSSLTGKVKGRARKIKGDADIRVNESTENVGLVIRVMTAVVDIKFPSGKVPKILNALESKEIYNGKKLV
LEVSQHISDSIVRCIALDSTDGLSRNDEFIDTGAPISVPVGRATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLT
DQKVTTEILVTGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESG
VINLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSGSEISALLGRIPSAVGYQP
TLAAEMGAMQERITSTNRGSITSVQAIYVPADDLTDPAPATSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQALSIDIV
GEKHYEVSKEVQRILQTYKSLQDIIAILGMEELSEEDKLIVARARKIQRFLSQPFHVAEVFTGTPGVFVSLEDTVSSFKD
IVEGKYDHLPEAAFYMVSNINEAVKKAELLQKEGK
>Mature_515_residues
MLRFYCNVRYRMSSLTGKVKGRARKIKGDADIRVNESTENVGLVIRVMTAVVDIKFPSGKVPKILNALESKEIYNGKKLV
LEVSQHISDSIVRCIALDSTDGLSRNDEFIDTGAPISVPVGRATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLT
DQKVTTEILVTGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESG
VINLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSGSEISALLGRIPSAVGYQP
TLAAEMGAMQERITSTNRGSITSVQAIYVPADDLTDPAPATSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQALSIDIV
GEKHYEVSKEVQRILQTYKSLQDIIAILGMEELSEEDKLIVARARKIQRFLSQPFHVAEVFTGTPGVFVSLEDTVSSFKD
IVEGKYDHLPEAAFYMVSNINEAVKKAELLQKEGK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=472, Percent_Identity=69.0677966101695, Blast_Score=662, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=317, Percent_Identity=27.1293375394322, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI19913428, Length=406, Percent_Identity=25.3694581280788, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI19913426, Length=373, Percent_Identity=24.6648793565684, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI50345984, Length=286, Percent_Identity=24.4755244755245, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI4757810, Length=286, Percent_Identity=24.4755244755245, Blast_Score=79, Evalue=9e-15,
Organism=Escherichia coli, GI1790170, Length=470, Percent_Identity=64.2553191489362, Blast_Score=598, Evalue=1e-172,
Organism=Escherichia coli, GI1788251, Length=411, Percent_Identity=28.9537712895377, Blast_Score=131, Evalue=9e-32,
Organism=Escherichia coli, GI1790172, Length=298, Percent_Identity=25.1677852348993, Blast_Score=89, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI25144756, Length=472, Percent_Identity=67.5847457627119, Blast_Score=653, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=323, Percent_Identity=28.1733746130031, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17570191, Length=425, Percent_Identity=24.2352941176471, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17510931, Length=429, Percent_Identity=23.7762237762238, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71988080, Length=286, Percent_Identity=24.8251748251748, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71988063, Length=286, Percent_Identity=24.8251748251748, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71988074, Length=267, Percent_Identity=22.4719101123595, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322581, Length=469, Percent_Identity=68.0170575692964, Blast_Score=646, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=366, Percent_Identity=25.4098360655738, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6319370, Length=308, Percent_Identity=25.6493506493506, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320016, Length=254, Percent_Identity=25.5905511811024, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24638766, Length=472, Percent_Identity=68.2203389830508, Blast_Score=647, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=507, Percent_Identity=63.3136094674556, Blast_Score=635, Evalue=0.0,
Organism=Drosophila melanogaster, GI24583992, Length=415, Percent_Identity=26.0240963855422, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI20129479, Length=308, Percent_Identity=27.2727272727273, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24583988, Length=320, Percent_Identity=26.5625, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24583986, Length=320, Percent_Identity=26.5625, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24583984, Length=320, Percent_Identity=26.5625, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI281361666, Length=428, Percent_Identity=24.5327102803738, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646341, Length=428, Percent_Identity=24.5327102803738, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17136796, Length=428, Percent_Identity=24.5327102803738, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24638768, Length=92, Percent_Identity=47.8260869565217, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24658560, Length=299, Percent_Identity=25.4180602006689, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 56332; Mature: 56332

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFYCNVRYRMSSLTGKVKGRARKIKGDADIRVNESTENVGLVIRVMTAVVDIKFPSGK
CEEEEEEEEEHHHHHHHHHCCCHHEECCCCCEEECCCCCCHHHHHHHHHHHHEEECCCCC
VPKILNALESKEIYNGKKLVLEVSQHISDSIVRCIALDSTDGLSRNDEFIDTGAPISVPV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCC
GRATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
PYLKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESG
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCC
VINLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQ
CEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHC
SGSEISALLGRIPSAVGYQPTLAAEMGAMQERITSTNRGSITSVQAIYVPADDLTDPAPA
CCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC
TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQALSIDIVGEKHYEVSKEVQRILQTYKS
CCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
LQDIIAILGMEELSEEDKLIVARARKIQRFLSQPFHVAEVFTGTPGVFVSLEDTVSSFKD
HHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCEEEEEHHHHHHHHH
IVEGKYDHLPEAAFYMVSNINEAVKKAELLQKEGK
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRFYCNVRYRMSSLTGKVKGRARKIKGDADIRVNESTENVGLVIRVMTAVVDIKFPSGK
CEEEEEEEEEHHHHHHHHHCCCHHEECCCCCEEECCCCCCHHHHHHHHHHHHEEECCCCC
VPKILNALESKEIYNGKKLVLEVSQHISDSIVRCIALDSTDGLSRNDEFIDTGAPISVPV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCC
GRATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
PYLKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESG
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCC
VINLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQ
CEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHC
SGSEISALLGRIPSAVGYQPTLAAEMGAMQERITSTNRGSITSVQAIYVPADDLTDPAPA
CCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC
TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQALSIDIVGEKHYEVSKEVQRILQTYKS
CCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
LQDIIAILGMEELSEEDKLIVARARKIQRFLSQPFHVAEVFTGTPGVFVSLEDTVSSFKD
HHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCEEEEEHHHHHHHHH
IVEGKYDHLPEAAFYMVSNINEAVKKAELLQKEGK
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA