| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617125
Identifier: 58617125
GI number: 58617125
Start: 661996
End: 662565
Strand: Reverse
Name: 58617125
Synonym: ERGA_CDS_03980
Alternate gene names: NA
Gene position: 662565-661996 (Counterclockwise)
Preceding gene: 58617126
Following gene: 58617124
Centisome position: 44.17
GC content: 26.32
Gene sequence:
>570_bases ATGATACACGAACAAGAGAAATTAATATATAAAATGATAGACAGATGCAATGATTATCAAAAGCTTTGTAAAATACAAAA AGAAATTTCTACATTAGTTAAAATAACACGAGACAAATCATTATTAAAAAATCTTTCTGATGTAAAACATGAAAAAACAA ATACACATACCAACGATGTTACTAATCATAGTACAAAAAAACTAGATCAACAACTAGATAATCCCCATCATGAAGATGAT ATAAATAAAATTAAAAATAACATAAAGTTACAACTTAACATGCTAAAATCAATGATTGCTCATAGAATGGACCCTGTACA AAGAGCAGGAGAAACTGTCAAATCAAATAACAAAGATGCAAAAAAATTTGGGAGATCAACAAAAGAAAATAAATCATCAA ATATGTTAACAGCATTACTAAAGATGATTGTAAACCAAATTACATTAATATTAAGCATAGCAGTAACTCATGATACTACT GAGCATAAAAAAAATACTGAACCAGAATATAGACCACAATATTTATCTAACATGTTATCTAACAATAGCCAAAAAACCAG AAGTAGATAA
Upstream 100 bases:
>100_bases AACATTAGTAAGTTCTGAAAAAGTGTTTTTTAATAATTATTAATATAAATCATTTACTATTTTAAATATTTTTAAGTTAG TTTTATAGATTTTAATTATT
Downstream 100 bases:
>100_bases TTTATCACTTCAATAACATTATTTTATATTATTAATATATTTAATAATTTCATTAAAGAAAACACTTATTATCTAAATTA ATAAAAGTTTCACACTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MIHEQEKLIYKMIDRCNDYQKLCKIQKEISTLVKITRDKSLLKNLSDVKHEKTNTHTNDVTNHSTKKLDQQLDNPHHEDD INKIKNNIKLQLNMLKSMIAHRMDPVQRAGETVKSNNKDAKKFGRSTKENKSSNMLTALLKMIVNQITLILSIAVTHDTT EHKKNTEPEYRPQYLSNMLSNNSQKTRSR
Sequences:
>Translated_189_residues MIHEQEKLIYKMIDRCNDYQKLCKIQKEISTLVKITRDKSLLKNLSDVKHEKTNTHTNDVTNHSTKKLDQQLDNPHHEDD INKIKNNIKLQLNMLKSMIAHRMDPVQRAGETVKSNNKDAKKFGRSTKENKSSNMLTALLKMIVNQITLILSIAVTHDTT EHKKNTEPEYRPQYLSNMLSNNSQKTRSR >Mature_189_residues MIHEQEKLIYKMIDRCNDYQKLCKIQKEISTLVKITRDKSLLKNLSDVKHEKTNTHTNDVTNHSTKKLDQQLDNPHHEDD INKIKNNIKLQLNMLKSMIAHRMDPVQRAGETVKSNNKDAKKFGRSTKENKSSNMLTALLKMIVNQITLILSIAVTHDTT EHKKNTEPEYRPQYLSNMLSNNSQKTRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22022; Mature: 22022
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHEQEKLIYKMIDRCNDYQKLCKIQKEISTLVKITRDKSLLKNLSDVKHEKTNTHTNDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TNHSTKKLDQQLDNPHHEDDINKIKNNIKLQLNMLKSMIAHRMDPVQRAGETVKSNNKDA CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH KKFGRSTKENKSSNMLTALLKMIVNQITLILSIAVTHDTTEHKKNTEPEYRPQYLSNMLS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHH NNSQKTRSR CCCHHHCCC >Mature Secondary Structure MIHEQEKLIYKMIDRCNDYQKLCKIQKEISTLVKITRDKSLLKNLSDVKHEKTNTHTNDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TNHSTKKLDQQLDNPHHEDDINKIKNNIKLQLNMLKSMIAHRMDPVQRAGETVKSNNKDA CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH KKFGRSTKENKSSNMLTALLKMIVNQITLILSIAVTHDTTEHKKNTEPEYRPQYLSNMLS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHH NNSQKTRSR CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA