| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617118
Identifier: 58617118
GI number: 58617118
Start: 648562
End: 649392
Strand: Reverse
Name: 58617118
Synonym: ERGA_CDS_03910
Alternate gene names: NA
Gene position: 649392-648562 (Counterclockwise)
Preceding gene: 58617119
Following gene: 58617117
Centisome position: 43.3
GC content: 27.32
Gene sequence:
>831_bases ATGTCATGCTTAAAATCAAAACATTCAATAAAATATTTCATTGCATTATGTGCCAATGTTACATATTTTAGTGTATTTCT TTTTGCAATATTTATACAACTAATAAACATTCCATCTAAACTTAGCGCTAGAGATCTGTTACTTATTAATGTACTAATGG TATTATTAGCACGTATTGCACTATTCTCATTAGCATTATATGAATTAAAATCTACTTATTCTAAGATCCAAGAAAATTCT TTAGAAAAATACAAAAAAGTAGCATATACAGCTGAGCTTATTAGTACAATAGTTGCAATAATAATACAAGCAATTGCAAT CAATAATATAATACTTGGTGATGTAGAAATAGTATCAACTAATAAATCAGTAATTCACACTAAAGGAGCTGTAGATTTTA CCTGCATACTAATAAAACTATTAATATCTGCACCATTACTAATGTATTTCAATTACCGCAGAATGAAAGACCCTAATATG AATGATCATAAAGGTAAATTGAAAACTTTATTCTATCTTTCTATAGCCATATTTATCACTAATTTTATAGCATTTGTTGG AAAAATAATTAATGTATTAGAACAAACTCAATCTTTTTCATTGTTTAATATACAAGGTAAGAATAACAACGGACCTGATA ACTTTCCTCTTGGGCCAATGATTAGAATTCTATGTATTGTAGTAAGTATTATTATATTAACAATTACATTTACTATTGAA TCATTTATAAGTTCAAACCTTAATGAATGTGCGGCATACCTAATACCTAATGTAACCACAGAAAAAAAAGTGGCTAAGGA GGGATTCGAACCCACGACACAAAGATTATGA
Upstream 100 bases:
>100_bases GCATCTGTTGTATTATTTTTAGCTAGTGATGCAAGTAAATATATTACAGGCCAAACCATACACGTTAATGGAGGGATGTT AATGTGTTAATATCTATAAT
Downstream 100 bases:
>100_bases TTCTTCTGCTCTGACCAACTGAGCTACATAGCCATTAAATGGTAAATAATCCTATAGCATAGGTTTAAATTTATTGCAAT ACATATATTATTAATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSCLKSKHSIKYFIALCANVTYFSVFLFAIFIQLINIPSKLSARDLLLINVLMVLLARIALFSLALYELKSTYSKIQENS LEKYKKVAYTAELISTIVAIIIQAIAINNIILGDVEIVSTNKSVIHTKGAVDFTCILIKLLISAPLLMYFNYRRMKDPNM NDHKGKLKTLFYLSIAIFITNFIAFVGKIINVLEQTQSFSLFNIQGKNNNGPDNFPLGPMIRILCIVVSIIILTITFTIE SFISSNLNECAAYLIPNVTTEKKVAKEGFEPTTQRL
Sequences:
>Translated_276_residues MSCLKSKHSIKYFIALCANVTYFSVFLFAIFIQLINIPSKLSARDLLLINVLMVLLARIALFSLALYELKSTYSKIQENS LEKYKKVAYTAELISTIVAIIIQAIAINNIILGDVEIVSTNKSVIHTKGAVDFTCILIKLLISAPLLMYFNYRRMKDPNM NDHKGKLKTLFYLSIAIFITNFIAFVGKIINVLEQTQSFSLFNIQGKNNNGPDNFPLGPMIRILCIVVSIIILTITFTIE SFISSNLNECAAYLIPNVTTEKKVAKEGFEPTTQRL >Mature_275_residues SCLKSKHSIKYFIALCANVTYFSVFLFAIFIQLINIPSKLSARDLLLINVLMVLLARIALFSLALYELKSTYSKIQENSL EKYKKVAYTAELISTIVAIIIQAIAINNIILGDVEIVSTNKSVIHTKGAVDFTCILIKLLISAPLLMYFNYRRMKDPNMN DHKGKLKTLFYLSIAIFITNFIAFVGKIINVLEQTQSFSLFNIQGKNNNGPDNFPLGPMIRILCIVVSIIILTITFTIES FISSNLNECAAYLIPNVTTEKKVAKEGFEPTTQRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31023; Mature: 30892
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCLKSKHSIKYFIALCANVTYFSVFLFAIFIQLINIPSKLSARDLLLINVLMVLLARIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LFSLALYELKSTYSKIQENSLEKYKKVAYTAELISTIVAIIIQAIAINNIILGDVEIVST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEC NKSVIHTKGAVDFTCILIKLLISAPLLMYFNYRRMKDPNMNDHKGKLKTLFYLSIAIFIT CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH NFIAFVGKIINVLEQTQSFSLFNIQGKNNNGPDNFPLGPMIRILCIVVSIIILTITFTIE HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SFISSNLNECAAYLIPNVTTEKKVAKEGFEPTTQRL HHHHCCHHHHHHHHCCCCCHHHHHHHCCCCCHHCCC >Mature Secondary Structure SCLKSKHSIKYFIALCANVTYFSVFLFAIFIQLINIPSKLSARDLLLINVLMVLLARIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LFSLALYELKSTYSKIQENSLEKYKKVAYTAELISTIVAIIIQAIAINNIILGDVEIVST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEC NKSVIHTKGAVDFTCILIKLLISAPLLMYFNYRRMKDPNMNDHKGKLKTLFYLSIAIFIT CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH NFIAFVGKIINVLEQTQSFSLFNIQGKNNNGPDNFPLGPMIRILCIVVSIIILTITFTIE HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SFISSNLNECAAYLIPNVTTEKKVAKEGFEPTTQRL HHHHCCHHHHHHHHCCCCCHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA