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The map label for this gene is ssb [H]

Identifier: 58617011

GI number: 58617011

Start: 478578

End: 479111

Strand: Reverse

Name: ssb [H]

Synonym: ERGA_CDS_02840

Alternate gene names: 58617011

Gene position: 479111-478578 (Counterclockwise)

Preceding gene: 58617017

Following gene: 58617010

Centisome position: 31.94

GC content: 32.02

Gene sequence:

>534_bases
TTGACTGGTTTATTAATAAAATACGATAATGAAATCGGCAAACTTAAAGTTAAGAATATAGCTATGTCCACTATGGGTAT
CAATAAAGTAATTTTAATCGGCAATCTAGGTAAAGATCCAGATATCAGGGTAATGCAAAATGGTAAGGAGATGGCAAGTT
TTTCTATTGCCACATCTGAAAGCTGGGTAGATAAATCCTCAGGTATACGTACAGAAAAAACTGAATGGCATAACATAGTA
GTGTTTAATGAAGGGTTAGTAAGGATAATTAAAAACTGTATACGTAAGGGAAGTAAAGTATATATTGAAGGATCACTAAG
GACAAGAAAATGGACAGATCAGAACAATATTGATCGCTACACAACAGAAGTAATCTTACAAGGATTTAATTCAGCATTAC
ATATGTTAGATTCCAAAGGCAATACAACAGATAATAATTCAGAATCTGAAGGGTACCCCAATGAAGAATTCAATAAAATG
CCTTTTCAAAACAGTTGTGAAGATGTTATAATTGATGACGAAATACCATTTTAA

Upstream 100 bases:

>100_bases
GTAATGAACTATCCATCAAAAACCCTAATTTACAAAATAGATATGTAAAATAACATCATTTTCTATTATTAGTCTATTTT
TTAAATATAAAATAAAAATA

Downstream 100 bases:

>100_bases
CTAAATAACATTTTTCTATAGGGTTTACTTAGCAATAGTCTTAGTATAATTAATAGTTAAATATCCTGTATATAATCAAT
AAGTAAAATAAGCTATATAT

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTGLLIKYDNEIGKLKVKNIAMSTMGINKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKSSGIRTEKTEWHNIV
VFNEGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNNIDRYTTEVILQGFNSALHMLDSKGNTTDNNSESEGYPNEEFNKM
PFQNSCEDVIIDDEIPF

Sequences:

>Translated_177_residues
MTGLLIKYDNEIGKLKVKNIAMSTMGINKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKSSGIRTEKTEWHNIV
VFNEGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNNIDRYTTEVILQGFNSALHMLDSKGNTTDNNSESEGYPNEEFNKM
PFQNSCEDVIIDDEIPF
>Mature_176_residues
TGLLIKYDNEIGKLKVKNIAMSTMGINKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKSSGIRTEKTEWHNIVV
FNEGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNNIDRYTTEVILQGFNSALHMLDSKGNTTDNNSESEGYPNEEFNKMP
FQNSCEDVIIDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=104, Percent_Identity=35.5769230769231, Blast_Score=75, Evalue=3e-14,
Organism=Escherichia coli, GI1790494, Length=118, Percent_Identity=52.5423728813559, Blast_Score=137, Evalue=3e-34,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20072; Mature: 19941

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLLIKYDNEIGKLKVKNIAMSTMGINKVILIGNLGKDPDIRVMQNGKEMASFSIATSE
CCCEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCHHHEEEEECCC
SWVDKSSGIRTEKTEWHNIVVFNEGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNNIDRY
CHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHH
TTEVILQGFNSALHMLDSKGNTTDNNSESEGYPNEEFNKMPFQNSCEDVIIDDEIPF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
TGLLIKYDNEIGKLKVKNIAMSTMGINKVILIGNLGKDPDIRVMQNGKEMASFSIATSE
CCEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCHHHEEEEECCC
SWVDKSSGIRTEKTEWHNIVVFNEGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNNIDRY
CHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHH
TTEVILQGFNSALHMLDSKGNTTDNNSESEGYPNEEFNKMPFQNSCEDVIIDDEIPF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA