| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58616991
Identifier: 58616991
GI number: 58616991
Start: 435013
End: 435837
Strand: Reverse
Name: 58616991
Synonym: ERGA_CDS_02640
Alternate gene names: NA
Gene position: 435837-435013 (Counterclockwise)
Preceding gene: 58616993
Following gene: 58616990
Centisome position: 29.06
GC content: 27.88
Gene sequence:
>825_bases ATGAAAAACATTAGTACAAAATTTAAACAACATCTATCATCAGAAATCCTTACTATTGCATACTGTCTACAACTTACTTT AAAAAATAACAAAGTAATTTGTTTGACTGACTTTGATCAAGATTTAATTGTTGATAATATTACTTATCAATCAGCACCTG GATTAAACATAGATATCTTAAAATACAATACTATTTCTGGTAATAGCACAAAAATAGAAAGCATAATAGATGGAAATACA ATAAAAGAAGAAGATGTACTGCTTGGAATGTATGATTTCACTACAGCAACAATATTCCTGGTAAATTATACAAATCCAAA CCAGGAGAATATAATATTATTCCATGGAAGTATAGAGAAAGTAACACTAACAAATAACAAGTTAATAGCAGAGCTTAATA GTTTATCACATCTTCTATCAAGAAATCTAGGAAACTTTTTTTCATCTTCATGCAGAGCCCAATTTTGTGACACTCAATGT AAACTTAACAAAGAACCTTTCACTAGCTCTCACTATATAACTAAAGTAATAAATAAACAAGAATTTGAATGTATCACTTT GATAAATACTGAAAATTATTACACATATGGATCAGTAACATTTATTACAGGAAAGAATAGTAATTCTACATTAGAGGTAA GGAAACATAATAAGTCATATATTCAATTTTATAATCCATTACCACATGACATGAACATCAATGATAAATTCTCTATAATA GCTGGCTGTGATAAAAGCTTTAACACATGTAGCTACAAATTTAACAACAGCAAAAATTTTAGGGGAGAGCCTCATATTCC TGAATTACAGTCCTATATGATCTAA
Upstream 100 bases:
>100_bases GTAACATTTCATACACAACATTAAATACATACTATCTAAAGCTTATGGTTACAAGATAGAACTCATCTTTATCCTATAAT AAATTAACTTTATAATATAC
Downstream 100 bases:
>100_bases GAAATATCTTTAATGCTAAATTGAGTACATAATATCCAATATGCTTACATGTGTATACACATAATAAATTTTTCAATAAT ATAATTTTGAGTACAATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage Protein; Gene Transfer Agent-Like Protein; NlpC/P60 Family Phage Cell Wall Peptidase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKNISTKFKQHLSSEILTIAYCLQLTLKNNKVICLTDFDQDLIVDNITYQSAPGLNIDILKYNTISGNSTKIESIIDGNT IKEEDVLLGMYDFTTATIFLVNYTNPNQENIILFHGSIEKVTLTNNKLIAELNSLSHLLSRNLGNFFSSSCRAQFCDTQC KLNKEPFTSSHYITKVINKQEFECITLINTENYYTYGSVTFITGKNSNSTLEVRKHNKSYIQFYNPLPHDMNINDKFSII AGCDKSFNTCSYKFNNSKNFRGEPHIPELQSYMI
Sequences:
>Translated_274_residues MKNISTKFKQHLSSEILTIAYCLQLTLKNNKVICLTDFDQDLIVDNITYQSAPGLNIDILKYNTISGNSTKIESIIDGNT IKEEDVLLGMYDFTTATIFLVNYTNPNQENIILFHGSIEKVTLTNNKLIAELNSLSHLLSRNLGNFFSSSCRAQFCDTQC KLNKEPFTSSHYITKVINKQEFECITLINTENYYTYGSVTFITGKNSNSTLEVRKHNKSYIQFYNPLPHDMNINDKFSII AGCDKSFNTCSYKFNNSKNFRGEPHIPELQSYMI >Mature_274_residues MKNISTKFKQHLSSEILTIAYCLQLTLKNNKVICLTDFDQDLIVDNITYQSAPGLNIDILKYNTISGNSTKIESIIDGNT IKEEDVLLGMYDFTTATIFLVNYTNPNQENIILFHGSIEKVTLTNNKLIAELNSLSHLLSRNLGNFFSSSCRAQFCDTQC KLNKEPFTSSHYITKVINKQEFECITLINTENYYTYGSVTFITGKNSNSTLEVRKHNKSYIQFYNPLPHDMNINDKFSII AGCDKSFNTCSYKFNNSKNFRGEPHIPELQSYMI
Specific function: Unknown
COG id: COG5449
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31312; Mature: 31312
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNISTKFKQHLSSEILTIAYCLQLTLKNNKVICLTDFDQDLIVDNITYQSAPGLNIDIL CCCHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCCCCEEEECCEECCCCCCEEEEE KYNTISGNSTKIESIIDGNTIKEEDVLLGMYDFTTATIFLVNYTNPNQENIILFHGSIEK EEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCEEEEEECCCEE VTLTNNKLIAELNSLSHLLSRNLGNFFSSSCRAQFCDTQCKLNKEPFTSSHYITKVINKQ EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCCCCCCHHHHHHCCCC EFECITLINTENYYTYGSVTFITGKNSNSTLEVRKHNKSYIQFYNPLPHDMNINDKFSII CCEEEEEEECCCEEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEE AGCDKSFNTCSYKFNNSKNFRGEPHIPELQSYMI EECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MKNISTKFKQHLSSEILTIAYCLQLTLKNNKVICLTDFDQDLIVDNITYQSAPGLNIDIL CCCHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCCCCEEEECCEECCCCCCEEEEE KYNTISGNSTKIESIIDGNTIKEEDVLLGMYDFTTATIFLVNYTNPNQENIILFHGSIEK EEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCEEEEEECCCEE VTLTNNKLIAELNSLSHLLSRNLGNFFSSSCRAQFCDTQCKLNKEPFTSSHYITKVINKQ EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCCCCCCHHHHHHCCCC EFECITLINTENYYTYGSVTFITGKNSNSTLEVRKHNKSYIQFYNPLPHDMNINDKFSII CCEEEEEEECCCEEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEE AGCDKSFNTCSYKFNNSKNFRGEPHIPELQSYMI EECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA