| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58616977
Identifier: 58616977
GI number: 58616977
Start: 410200
End: 411117
Strand: Reverse
Name: 58616977
Synonym: ERGA_CDS_02500
Alternate gene names: NA
Gene position: 411117-410200 (Counterclockwise)
Preceding gene: 58616978
Following gene: 58616976
Centisome position: 27.41
GC content: 32.46
Gene sequence:
>918_bases GTGCTTTTTACAGGAGGACAACGTGCTATGAATAGAATAAGATTAAACAAAAAACAACAAAGTTTTCTCGATTATATGAG GTTATTGGTTGTACGCTATAATCCCCAACCTTTTTCAGCCTTTCGTCATCCTATGCGTTATCTTTGTGGTAAGTTTTATG AACTACTTTGTAATAAACAAGGTAATCAAAATAAAGCATGTCTTCTTCTAACTGAAGAGATATGTGATTATATAATTAAG TGTTCAATTTCATATGATGATTTAGTTAAAGTATTAGATGTTTTCAATAGTCTTCACAATGAGACGTGTTTTCTAAATAT GATACATTCTCAGTTACTTTCCTCAATTGTTAGTCAACATCAAGGTAATTTAGTAATAGATGGAGAATTTAATATAGGTG GTAATCCGTTCAATCTACACGTACTAAATAATTATTTAACACATGTGTCAAAATATGTGAACAATAGTAACGCTAAAGTA CTTCAGGGTGAAGCAATGACAATTCTTAATGCTGTAATTCCTCTTACTCCACACAATGTGTTACTGAGGGGAGTAGCACG TGCAGTAATCATTATAACTGGTAATGAATGTAATTCTTCATTAGGTGATGATCCAGGAAAACAACTTAAAATAGAGTACA GTGCTGCTGTCAGTCTAATTACTGCTTCTTTGACAACAAGTTATAGAAGTAGTATTTTATCAGAACTACAAGAAGATTTT GCTGAAGAAAACAGTAGTTCTACTACAGGAACAATTACAAGTATTATCTATAACACAGCATCAGCGCTAAGTAATAATAT ACAGCTGCTTGGTTCTTTCATTTTACAAAATAGAGCTCCAAGTTCAAATGTATCTGCTTCTACAACACATCAAGGTTTAC CTACTACACCAACGCAACAACGTAGACATAGTATTTAG
Upstream 100 bases:
>100_bases CAATTTTTTAATATAGGATTTGTACTGGTTATGCAGGTTTTATAAGGAATTATTAATATAGTCACTATAATGACTTCCTT AGTAAGACTGGGCATGTTAG
Downstream 100 bases:
>100_bases TATTTTTTTAAAGATGTGTATTGATATATTAATTAGTATTTTATAGTAATTATATTATAATCTGCATAATAGTATATACA GTAAATATTCTTTATTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MLFTGGQRAMNRIRLNKKQQSFLDYMRLLVVRYNPQPFSAFRHPMRYLCGKFYELLCNKQGNQNKACLLLTEEICDYIIK CSISYDDLVKVLDVFNSLHNETCFLNMIHSQLLSSIVSQHQGNLVIDGEFNIGGNPFNLHVLNNYLTHVSKYVNNSNAKV LQGEAMTILNAVIPLTPHNVLLRGVARAVIIITGNECNSSLGDDPGKQLKIEYSAAVSLITASLTTSYRSSILSELQEDF AEENSSSTTGTITSIIYNTASALSNNIQLLGSFILQNRAPSSNVSASTTHQGLPTTPTQQRRHSI
Sequences:
>Translated_305_residues MLFTGGQRAMNRIRLNKKQQSFLDYMRLLVVRYNPQPFSAFRHPMRYLCGKFYELLCNKQGNQNKACLLLTEEICDYIIK CSISYDDLVKVLDVFNSLHNETCFLNMIHSQLLSSIVSQHQGNLVIDGEFNIGGNPFNLHVLNNYLTHVSKYVNNSNAKV LQGEAMTILNAVIPLTPHNVLLRGVARAVIIITGNECNSSLGDDPGKQLKIEYSAAVSLITASLTTSYRSSILSELQEDF AEENSSSTTGTITSIIYNTASALSNNIQLLGSFILQNRAPSSNVSASTTHQGLPTTPTQQRRHSI >Mature_305_residues MLFTGGQRAMNRIRLNKKQQSFLDYMRLLVVRYNPQPFSAFRHPMRYLCGKFYELLCNKQGNQNKACLLLTEEICDYIIK CSISYDDLVKVLDVFNSLHNETCFLNMIHSQLLSSIVSQHQGNLVIDGEFNIGGNPFNLHVLNNYLTHVSKYVNNSNAKV LQGEAMTILNAVIPLTPHNVLLRGVARAVIIITGNECNSSLGDDPGKQLKIEYSAAVSLITASLTTSYRSSILSELQEDF AEENSSSTTGTITSIIYNTASALSNNIQLLGSFILQNRAPSSNVSASTTHQGLPTTPTQQRRHSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33879; Mature: 33879
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFTGGQRAMNRIRLNKKQQSFLDYMRLLVVRYNPQPFSAFRHPMRYLCGKFYELLCNKQ CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GNQNKACLLLTEEICDYIIKCSISYDDLVKVLDVFNSLHNETCFLNMIHSQLLSSIVSQH CCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC QGNLVIDGEFNIGGNPFNLHVLNNYLTHVSKYVNNSNAKVLQGEAMTILNAVIPLTPHNV CCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCHHH LLRGVARAVIIITGNECNSSLGDDPGKQLKIEYSAAVSLITASLTTSYRSSILSELQEDF HHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEENSSSTTGTITSIIYNTASALSNNIQLLGSFILQNRAPSSNVSASTTHQGLPTTPTQQ HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH RRHSI HHCCC >Mature Secondary Structure MLFTGGQRAMNRIRLNKKQQSFLDYMRLLVVRYNPQPFSAFRHPMRYLCGKFYELLCNKQ CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GNQNKACLLLTEEICDYIIKCSISYDDLVKVLDVFNSLHNETCFLNMIHSQLLSSIVSQH CCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC QGNLVIDGEFNIGGNPFNLHVLNNYLTHVSKYVNNSNAKVLQGEAMTILNAVIPLTPHNV CCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCHHH LLRGVARAVIIITGNECNSSLGDDPGKQLKIEYSAAVSLITASLTTSYRSSILSELQEDF HHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEENSSSTTGTITSIIYNTASALSNNIQLLGSFILQNRAPSSNVSASTTHQGLPTTPTQQ HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH RRHSI HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA