| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58616963
Identifier: 58616963
GI number: 58616963
Start: 383183
End: 384436
Strand: Reverse
Name: 58616963
Synonym: ERGA_CDS_02360
Alternate gene names: NA
Gene position: 384436-383183 (Counterclockwise)
Preceding gene: 58616964
Following gene: 58616962
Centisome position: 25.63
GC content: 30.86
Gene sequence:
>1254_bases ATGCCAAACATTCTATCTTTTTTATTATCTATAAAACAACTTAAACCTACTAACTTCATACGCAATACAACTGATATAGA TAATACTGCACATGACACTATATCAGAATTGTGCAACAAATGTCTGTCATTAAGTATAAATGGCATATATGTTGATGTAT CAAAAAATATAAGACAACGTAAAGTACGATATTCAGGGTTTCCATTTCAACATAAAGAACGTGCAATTTTACTATCCGCA CTATCACAGCTTTGTTTTGAATATGCCCATACCACACCTAATATAGTACTATTTGATGAACTAGCAACCATACTAAATAA CGACAATTTATTTAACATAGGCAACAAAACTACTTCTCATCTGTTTCCAATAATCAAGAAACACACTTCAGATCATACAA ATCTTTCACAAGAACGTCATAACAACATTCATATTAATTGTGATACAAATCAACCAAACATAATGCATGTTTCTTTTGCT CAACATGTAAGTTTTGCAAATGATTCTTCGCAACCATCTATATCTACAGAAACACAAATCAGATTCATGGTAGAAGCTTG TCCTGATAACACTATTAACTATAGTCGTATCAAATTCACAATGACTTTACCAAAAACAATAAATAACCATAGTTTTTTGA GTAATTGGGATATTTTTAAAGTAAATTGCAGAATAACTATACAGAATATTGTAAATAAAATAACTTCATTTTTTACTAGA AGACCCTATAAACCACAACCAAAATTCAAAAAAACAGCATTCACACAATCAATGTCTACATTGGAATATAGCTTACAAGA TTTTTCAGTAAATGCACAAAGACCTCAACAAGATATCAGTCGTCATATATGTGACTTTCGACAAGCTTTTGAAAAATTTA AAACAGAACAAATAACAAGCCAAAATAAATCACAACCTTGTTCTGAGTCAAGCTTATCATCTGAAATTGATGCTATACTC AGTTCTAATAATCCTTTTTTAAATTTGCAAACATCTTCAGAAAAAAACATAGTGGATACACCAGAATCTAGAGTCGATCC AACAAATTACGGTACAACATTATATCCTAAATCTGACTCCGAAACACCTGATGATCCCAATAACAGGAAATGTACAGTAG AAGATGATATACCATTCTCTTCTTTCACTACATTTGCTGAATTACATGATGCATGTGCACCAGAACCTATAGTAGGTGAA AAAGAAGACAAAGAAGGAAAGTCTAATTCTAGATCATCATCACCACAAAGATAA
Upstream 100 bases:
>100_bases AGCACGACAACTCAAGATGTTAGTACTAGATTCCCAGAACAACAAAGTCGTTCACTATAATTAATACAACTAAATATCTT TTACTAATAAAATTAAGTAT
Downstream 100 bases:
>100_bases CAACATACAGCAATGTAAATAGACAATTCATATTAATATAGGCCAAATGTATTAGTAAAACATGTAGATATTTACCTTAC AAATTAGCAAAATATTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MPNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQRKVRYSGFPFQHKERAILLSA LSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSHLFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFA QHVSFANDSSQPSISTETQIRFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITSQNKSQPCSESSLSSEIDAIL SSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDSETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGE KEDKEGKSNSRSSSPQR
Sequences:
>Translated_417_residues MPNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQRKVRYSGFPFQHKERAILLSA LSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSHLFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFA QHVSFANDSSQPSISTETQIRFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITSQNKSQPCSESSLSSEIDAIL SSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDSETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGE KEDKEGKSNSRSSSPQR >Mature_416_residues PNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQRKVRYSGFPFQHKERAILLSAL SQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSHLFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFAQ HVSFANDSSQPSISTETQIRFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTRR PYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITSQNKSQPCSESSLSSEIDAILS SNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDSETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGEK EDKEGKSNSRSSSPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47542; Mature: 47410
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQR CCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEECCCCHHHH KVRYSGFPFQHKERAILLSALSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSH HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCHHH LFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFAQHVSFANDSSQPSISTETQI HHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEE RFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR EEEEEECCCCCCCEEEEEEEEECCCCCCCCCEECCCCEEEEEEEEEHHHHHHHHHHHHHC RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITS CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QNKSQPCSESSLSSEIDAILSSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDS CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCEECCCCCC ETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGEKEDKEGKSNSRSSSPQR CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQR CHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEECCCCHHHH KVRYSGFPFQHKERAILLSALSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSH HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCHHH LFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFAQHVSFANDSSQPSISTETQI HHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEE RFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR EEEEEECCCCCCCEEEEEEEEECCCCCCCCCEECCCCEEEEEEEEEHHHHHHHHHHHHHC RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITS CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QNKSQPCSESSLSSEIDAILSSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDS CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCEECCCCCC ETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGEKEDKEGKSNSRSSSPQR CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA