Definition Ehrlichia ruminantium str. Gardel, complete genome.
Accession NC_006831
Length 1,499,920

Click here to switch to the map view.

The map label for this gene is 58616963

Identifier: 58616963

GI number: 58616963

Start: 383183

End: 384436

Strand: Reverse

Name: 58616963

Synonym: ERGA_CDS_02360

Alternate gene names: NA

Gene position: 384436-383183 (Counterclockwise)

Preceding gene: 58616964

Following gene: 58616962

Centisome position: 25.63

GC content: 30.86

Gene sequence:

>1254_bases
ATGCCAAACATTCTATCTTTTTTATTATCTATAAAACAACTTAAACCTACTAACTTCATACGCAATACAACTGATATAGA
TAATACTGCACATGACACTATATCAGAATTGTGCAACAAATGTCTGTCATTAAGTATAAATGGCATATATGTTGATGTAT
CAAAAAATATAAGACAACGTAAAGTACGATATTCAGGGTTTCCATTTCAACATAAAGAACGTGCAATTTTACTATCCGCA
CTATCACAGCTTTGTTTTGAATATGCCCATACCACACCTAATATAGTACTATTTGATGAACTAGCAACCATACTAAATAA
CGACAATTTATTTAACATAGGCAACAAAACTACTTCTCATCTGTTTCCAATAATCAAGAAACACACTTCAGATCATACAA
ATCTTTCACAAGAACGTCATAACAACATTCATATTAATTGTGATACAAATCAACCAAACATAATGCATGTTTCTTTTGCT
CAACATGTAAGTTTTGCAAATGATTCTTCGCAACCATCTATATCTACAGAAACACAAATCAGATTCATGGTAGAAGCTTG
TCCTGATAACACTATTAACTATAGTCGTATCAAATTCACAATGACTTTACCAAAAACAATAAATAACCATAGTTTTTTGA
GTAATTGGGATATTTTTAAAGTAAATTGCAGAATAACTATACAGAATATTGTAAATAAAATAACTTCATTTTTTACTAGA
AGACCCTATAAACCACAACCAAAATTCAAAAAAACAGCATTCACACAATCAATGTCTACATTGGAATATAGCTTACAAGA
TTTTTCAGTAAATGCACAAAGACCTCAACAAGATATCAGTCGTCATATATGTGACTTTCGACAAGCTTTTGAAAAATTTA
AAACAGAACAAATAACAAGCCAAAATAAATCACAACCTTGTTCTGAGTCAAGCTTATCATCTGAAATTGATGCTATACTC
AGTTCTAATAATCCTTTTTTAAATTTGCAAACATCTTCAGAAAAAAACATAGTGGATACACCAGAATCTAGAGTCGATCC
AACAAATTACGGTACAACATTATATCCTAAATCTGACTCCGAAACACCTGATGATCCCAATAACAGGAAATGTACAGTAG
AAGATGATATACCATTCTCTTCTTTCACTACATTTGCTGAATTACATGATGCATGTGCACCAGAACCTATAGTAGGTGAA
AAAGAAGACAAAGAAGGAAAGTCTAATTCTAGATCATCATCACCACAAAGATAA

Upstream 100 bases:

>100_bases
AGCACGACAACTCAAGATGTTAGTACTAGATTCCCAGAACAACAAAGTCGTTCACTATAATTAATACAACTAAATATCTT
TTACTAATAAAATTAAGTAT

Downstream 100 bases:

>100_bases
CAACATACAGCAATGTAAATAGACAATTCATATTAATATAGGCCAAATGTATTAGTAAAACATGTAGATATTTACCTTAC
AAATTAGCAAAATATTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MPNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQRKVRYSGFPFQHKERAILLSA
LSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSHLFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFA
QHVSFANDSSQPSISTETQIRFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR
RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITSQNKSQPCSESSLSSEIDAIL
SSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDSETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGE
KEDKEGKSNSRSSSPQR

Sequences:

>Translated_417_residues
MPNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQRKVRYSGFPFQHKERAILLSA
LSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSHLFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFA
QHVSFANDSSQPSISTETQIRFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR
RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITSQNKSQPCSESSLSSEIDAIL
SSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDSETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGE
KEDKEGKSNSRSSSPQR
>Mature_416_residues
PNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQRKVRYSGFPFQHKERAILLSAL
SQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSHLFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFAQ
HVSFANDSSQPSISTETQIRFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTRR
PYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITSQNKSQPCSESSLSSEIDAILS
SNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDSETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGEK
EDKEGKSNSRSSSPQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47542; Mature: 47410

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQR
CCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEECCCCHHHH
KVRYSGFPFQHKERAILLSALSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSH
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCHHH
LFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFAQHVSFANDSSQPSISTETQI
HHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEE
RFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR
EEEEEECCCCCCCEEEEEEEEECCCCCCCCCEECCCCEEEEEEEEEHHHHHHHHHHHHHC
RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QNKSQPCSESSLSSEIDAILSSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDS
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCEECCCCCC
ETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGEKEDKEGKSNSRSSSPQR
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PNILSFLLSIKQLKPTNFIRNTTDIDNTAHDTISELCNKCLSLSINGIYVDVSKNIRQR
CHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEECCCCHHHH
KVRYSGFPFQHKERAILLSALSQLCFEYAHTTPNIVLFDELATILNNDNLFNIGNKTTSH
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCHHH
LFPIIKKHTSDHTNLSQERHNNIHINCDTNQPNIMHVSFAQHVSFANDSSQPSISTETQI
HHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEE
RFMVEACPDNTINYSRIKFTMTLPKTINNHSFLSNWDIFKVNCRITIQNIVNKITSFFTR
EEEEEECCCCCCCEEEEEEEEECCCCCCCCCEECCCCEEEEEEEEEHHHHHHHHHHHHHC
RPYKPQPKFKKTAFTQSMSTLEYSLQDFSVNAQRPQQDISRHICDFRQAFEKFKTEQITS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QNKSQPCSESSLSSEIDAILSSNNPFLNLQTSSEKNIVDTPESRVDPTNYGTTLYPKSDS
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCEECCCCCC
ETPDDPNNRKCTVEDDIPFSSFTTFAELHDACAPEPIVGEKEDKEGKSNSRSSSPQR
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA