| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
Click here to switch to the map view.
The map label for this gene is 58616949
Identifier: 58616949
GI number: 58616949
Start: 361098
End: 362207
Strand: Reverse
Name: 58616949
Synonym: ERGA_CDS_02220
Alternate gene names: NA
Gene position: 362207-361098 (Counterclockwise)
Preceding gene: 58616950
Following gene: 58616948
Centisome position: 24.15
GC content: 28.74
Gene sequence:
>1110_bases ATGTTTTTATTCCTATTAAAATCTGAAAGTACATACAAGTATCTTTTCATCACAATGGTAACACTTATATCATTACTTTT ACTCATGTTAATAGTTATCAGAGTAATATACTTTAGTAAAGATAAAAGCAGTATTGATCAAAAGAAACTTATCTTCCAGG AATACATATCAAGTCTTCAATTCAATCACTTACCAGAAATGATAATTTCTGAAAAGCTAAATCAAGACACTATACGTGGA AAGTCTGCTTTGATAGATATCCCACGTATCAAAATAGAAATTAATGGACACATAATTCATAACAAGGATGAAAAAAATGA TGGTACTAATCCAATAGAAAAAGCAGAACGTAAAAATTCTTACAAATTTAGTAGCCTTGAGCATACTCATAAACAATATG TATATAGCTTAACAGGACCTGATACTGATATTTCAACTTTAGATCATAGAATTAAAGCTGCTGCATATCTTGAACATATA TTCGCAGAACATGGACAAATACCTAAAATAAATCTCATACATGAATTAGTAACTTACTTACATCAAGGAGCATATATAGG ACAAGCGCTTCTCTTAATATATAACAGTCTTACACAACATCTCGCTACACATAGCGAACACATAATAAAAAAAGATTCTA TAGTATCAATCAAAGTAATCAACAGTAACTCTATTCAATTAAATATAAAGCAAAAGTTAGATGTTCACACTTTTGATAGT GATCATAATCTAACAGAAGCAAAGTATACTATTAATCCTGAGATATCTTTTCTAATGTCATCAGAACCAAACAACACTGC AGCTCCCATCTTGTATAGTCAAGTTCAGATACAATTTAATAAGCCTAAATCTTTATCAAAATATTTCAGTACCAAGACAT ACGAACACATAAAAAATGGTCATAAGTTTATTGTATCAATAAAAAATGGTATAAATAAAGTAATATTAAGAATGTCTAAT TTCAAGTCACCACCTCATTCAGAATATCTACTAAGTAAAGGAGATTACAAAATCTCAGAATATTATGCTCAAGACAATAC TCATACTTATCTAGATAGTACAACATGCAGTGAAGCTTGTTTTTTAAGACAAAAACATGATACATTATAG
Upstream 100 bases:
>100_bases ATCCCTTCTTAAATAATTTACTTGAAAAATTAACATAATTAATGCATTATTATATAAAGAGACTAGTAAGTTTATTAATC CGATTACTAAGGTCACTATA
Downstream 100 bases:
>100_bases AATATATAGTATGCTCTGTATAAAATACAAGCGTTTTAATGTAAGCAATTGATAATGCTATAGCACTATTATTTTTTATG ATTCACTTATACAATTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MFLFLLKSESTYKYLFITMVTLISLLLLMLIVIRVIYFSKDKSSIDQKKLIFQEYISSLQFNHLPEMIISEKLNQDTIRG KSALIDIPRIKIEINGHIIHNKDEKNDGTNPIEKAERKNSYKFSSLEHTHKQYVYSLTGPDTDISTLDHRIKAAAYLEHI FAEHGQIPKINLIHELVTYLHQGAYIGQALLLIYNSLTQHLATHSEHIIKKDSIVSIKVINSNSIQLNIKQKLDVHTFDS DHNLTEAKYTINPEISFLMSSEPNNTAAPILYSQVQIQFNKPKSLSKYFSTKTYEHIKNGHKFIVSIKNGINKVILRMSN FKSPPHSEYLLSKGDYKISEYYAQDNTHTYLDSTTCSEACFLRQKHDTL
Sequences:
>Translated_369_residues MFLFLLKSESTYKYLFITMVTLISLLLLMLIVIRVIYFSKDKSSIDQKKLIFQEYISSLQFNHLPEMIISEKLNQDTIRG KSALIDIPRIKIEINGHIIHNKDEKNDGTNPIEKAERKNSYKFSSLEHTHKQYVYSLTGPDTDISTLDHRIKAAAYLEHI FAEHGQIPKINLIHELVTYLHQGAYIGQALLLIYNSLTQHLATHSEHIIKKDSIVSIKVINSNSIQLNIKQKLDVHTFDS DHNLTEAKYTINPEISFLMSSEPNNTAAPILYSQVQIQFNKPKSLSKYFSTKTYEHIKNGHKFIVSIKNGINKVILRMSN FKSPPHSEYLLSKGDYKISEYYAQDNTHTYLDSTTCSEACFLRQKHDTL >Mature_369_residues MFLFLLKSESTYKYLFITMVTLISLLLLMLIVIRVIYFSKDKSSIDQKKLIFQEYISSLQFNHLPEMIISEKLNQDTIRG KSALIDIPRIKIEINGHIIHNKDEKNDGTNPIEKAERKNSYKFSSLEHTHKQYVYSLTGPDTDISTLDHRIKAAAYLEHI FAEHGQIPKINLIHELVTYLHQGAYIGQALLLIYNSLTQHLATHSEHIIKKDSIVSIKVINSNSIQLNIKQKLDVHTFDS DHNLTEAKYTINPEISFLMSSEPNNTAAPILYSQVQIQFNKPKSLSKYFSTKTYEHIKNGHKFIVSIKNGINKVILRMSN FKSPPHSEYLLSKGDYKISEYYAQDNTHTYLDSTTCSEACFLRQKHDTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42568; Mature: 42568
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFLLKSESTYKYLFITMVTLISLLLLMLIVIRVIYFSKDKSSIDQKKLIFQEYISSLQ CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC FNHLPEMIISEKLNQDTIRGKSALIDIPRIKIEINGHIIHNKDEKNDGTNPIEKAERKNS CCCCHHHHHHHHCCHHHHCCCCEEEECCEEEEEEECEEEECCCCCCCCCCHHHHHHHCCC YKFSSLEHTHKQYVYSLTGPDTDISTLDHRIKAAAYLEHIFAEHGQIPKINLIHELVTYL CCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH HQGAYIGQALLLIYNSLTQHLATHSEHIIKKDSIVSIKVINSNSIQLNIKQKLDVHTFDS HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEECCEEEECCC DHNLTEAKYTINPEISFLMSSEPNNTAAPILYSQVQIQFNKPKSLSKYFSTKTYEHIKNG CCCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC HKFIVSIKNGINKVILRMSNFKSPPHSEYLLSKGDYKISEYYAQDNTHTYLDSTTCSEAC CEEEEEHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCEEEHEEECCCCEEEECCCCHHHHH FLRQKHDTL HHHHHCCCC >Mature Secondary Structure MFLFLLKSESTYKYLFITMVTLISLLLLMLIVIRVIYFSKDKSSIDQKKLIFQEYISSLQ CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC FNHLPEMIISEKLNQDTIRGKSALIDIPRIKIEINGHIIHNKDEKNDGTNPIEKAERKNS CCCCHHHHHHHHCCHHHHCCCCEEEECCEEEEEEECEEEECCCCCCCCCCHHHHHHHCCC YKFSSLEHTHKQYVYSLTGPDTDISTLDHRIKAAAYLEHIFAEHGQIPKINLIHELVTYL CCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH HQGAYIGQALLLIYNSLTQHLATHSEHIIKKDSIVSIKVINSNSIQLNIKQKLDVHTFDS HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEECCEEEECCC DHNLTEAKYTINPEISFLMSSEPNNTAAPILYSQVQIQFNKPKSLSKYFSTKTYEHIKNG CCCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC HKFIVSIKNGINKVILRMSNFKSPPHSEYLLSKGDYKISEYYAQDNTHTYLDSTTCSEAC CEEEEEHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCEEEHEEECCCCEEEECCCCHHHHH FLRQKHDTL HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA