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The map label for this gene is perM [C]

Identifier: 58616916

GI number: 58616916

Start: 309965

End: 311086

Strand: Reverse

Name: perM [C]

Synonym: ERGA_CDS_01890

Alternate gene names: 58616916

Gene position: 311086-309965 (Counterclockwise)

Preceding gene: 58616917

Following gene: 58616915

Centisome position: 20.74

GC content: 26.56

Gene sequence:

>1122_bases
ATGAGTGATCATATTTCTAAATTAGTTAATCAGTATGTAACATATGGTATTGCAGTAGCCGTAATTTTGCTAGCAGCATT
CATTATGGAGCCTGTACTCATTCCATGCTGTACTGCTATAATAATAGCATATCTTCTCAATCCACTTGTCAATAAATTAG
AAAAGCTTAGATTACCAAGACAATTATCTGTACTAATAATTCTAATATCTGCATTATATATCATCATAGCCTTCTTAATC
ATATTTATTCCAATCACATATTCACAACTCCTATCATTAATAAAATTCCTTATAGAAAAAATACCAATAGTCAGTAAGAA
TAATATTTCATCTTTTCTACAGAAATATAACATTTCTGAATATGAAGAAATAATCAAAGCTATAAAATTACCAGAATCAT
CACTTGAAAGCTTATTAAATTACGATAATATAAAATCTTTATTTAATATCTTCGGTACTGGTTTAAAAAATATAGATACT
ATATTTCTCGGAGCAATAAACTCAAGTATAAATATTGGCTACACAGTTTCTACAATACTAATTACTCTTATATTATTATT
CTACATACTGTCTAACTGGCCATCAATTATCAAACATGCAACAGAATTAATACCTATAAAACATCAAAAGACTGTAATAG
AATACACAGAAAAAATAGATAATATAATTTCCGCATATATAAGAGGTCAACTAAGCGTATGCCTCATCATGGCTATATAT
TATACTATATGCCTTTGTATAATAAATTTAAAATATTTTTTGATAATAGGACTCATCTCTGGTTTAATGACTTTTATTCC
ATATATAGGACCAGTATTTTGTACTACAATAAGTTGCATTATAACAATGCTTCAATTTAATAATTGGACAACATGTGGTA
TAGTAATTGCAATGTTTATTATTGGCCAATTAGTTGAATCAAATGTGATAACTCCATTACTCATAGGAAAACGTATAGAT
ATACATCCTATATGGATAATTATTGGTATGATAATATGTGGATCACAAATTGGATTTATCGGTATATTATTATCAATTCC
TATAACTGCGGTAGTAGGAGTATTTGTAAAATCAATTATAAATCAATATATGAATAGCAAATTTTACAATAATACTAACT
AA

Upstream 100 bases:

>100_bases
ATTATGACTCAAAGTTTAACAAAAGTGTGAGTCTATATAATAACTAGCATAATGTACTAAAATGATATAATATCATTAGT
TAGTATATGTACAAAAGCTA

Downstream 100 bases:

>100_bases
AACCAAAAAGAGTATTATTTATATAAGAAATACATAGAGAATATTTATAATGACAGAATATGTTTTTTTAAAACAAGTAA
TACTATGTCTAGTATTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSDHISKLVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPRQLSVLIILISALYIIIAFLI
IFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISEYEEIIKAIKLPESSLESLLNYDNIKSLFNIFGTGLKNIDT
IFLGAINSSINIGYTVSTILITLILLFYILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIY
YTICLCIINLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFIIGQLVESNVITPLLIGKRID
IHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSIINQYMNSKFYNNTN

Sequences:

>Translated_373_residues
MSDHISKLVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPRQLSVLIILISALYIIIAFLI
IFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISEYEEIIKAIKLPESSLESLLNYDNIKSLFNIFGTGLKNIDT
IFLGAINSSINIGYTVSTILITLILLFYILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIY
YTICLCIINLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFIIGQLVESNVITPLLIGKRID
IHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSIINQYMNSKFYNNTN
>Mature_372_residues
SDHISKLVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPRQLSVLIILISALYIIIAFLII
FIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISEYEEIIKAIKLPESSLESLLNYDNIKSLFNIFGTGLKNIDTI
FLGAINSSINIGYTVSTILITLILLFYILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIYY
TICLCIINLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFIIGQLVESNVITPLLIGKRIDI
HPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSIINQYMNSKFYNNTN

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=360, Percent_Identity=22.5, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787885, Length=333, Percent_Identity=21.9219219219219, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41845; Mature: 41714

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHISKLVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QLSVLIILISALYIIIAFLIIFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHH
YEEIIKAIKLPESSLESLLNYDNIKSLFNIFGTGLKNIDTIFLGAINSSINIGYTVSTIL
HHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH
ITLILLFYILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIY
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTICLCIINLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGQLVESNVITPLLIGKRIDIHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSII
HHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NQYMNSKFYNNTN
HHHHCCCCCCCCC
>Mature Secondary Structure 
SDHISKLVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QLSVLIILISALYIIIAFLIIFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHH
YEEIIKAIKLPESSLESLLNYDNIKSLFNIFGTGLKNIDTIFLGAINSSINIGYTVSTIL
HHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH
ITLILLFYILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIY
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTICLCIINLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGQLVESNVITPLLIGKRIDIHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSII
HHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NQYMNSKFYNNTN
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]