Click here to switch to the map view.

The map label for this gene is yrbD [C]

Identifier: 58616845

GI number: 58616845

Start: 199702

End: 200151

Strand: Reverse

Name: yrbD [C]

Synonym: ERGA_CDS_01180

Alternate gene names: 58616845

Gene position: 200151-199702 (Counterclockwise)

Preceding gene: 58616846

Following gene: 58616844

Centisome position: 13.34

GC content: 29.33

Gene sequence:

>450_bases
ATGCATAGATCAAATATTATTGAAATTTTTATAGGATTCCTAGTGTTAGCAGGAGCAATATCTATTGGGATAATAGCATT
TAACAAATTACCATATAAAAATACCTTGCGTAATTGTTATACAGTTAAAGCATTTTTCTCAAATGTAGATGGGTTGGACA
TAGGAGATGAAGTAACAATATCAGGAGTAAAAATAGGTACAGTAACTTCAATATCATTGAATGAAAGCTATACTCCTATA
GTAACAATGTGCATACAGAAAAATATCTTACTACCTTCAGATAGTTCAGCATCTATATTAAACAGCAATATGTTAGGAAA
AAAGCACATTGATATCGAACTTGGATCAGATCAAGAAGTCATCGTAAGTGAAGGTTTAATAGAACATACACATTCAGATT
TAAGTTTCAATGCAATTATTGCTAAAATAATAGATTCACTTATTAAGTAG

Upstream 100 bases:

>100_bases
AGAAAAAAATCTACATGTACCAAATTTAACCGGAACTAAGTACGCCTACCATCCTCAAAAGTCTTTTAAATAACACAAAA
CATATTAACATCGGTATTTT

Downstream 100 bases:

>100_bases
TCAATATCAATTGTTAAATACAAATTTGACAACAAGCATATTATAACTAACTAATAGGATGAACAACTAAATAAAGATAA
TATAAATATTTGACATTATT

Product: ABC transporter substrate binding protein

Products: NA

Alternate protein names: Mce-Related Protein; Luene Transport System Ttg2C Protein; ABC Transporter; Luene Tolerance C; Conserved Family Protein; Mce Related Protein; Mce Related Family; Mce Family Protein; Mammalian Cell Entry Related Domain-Containing Protein; Cell Entry-Like Protein; Signal Peptide Protein; Virulence Protein Transporter; ABC-Type Transport System Protein; Mammalian Cell Entry Related Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MHRSNIIEIFIGFLVLAGAISIGIIAFNKLPYKNTLRNCYTVKAFFSNVDGLDIGDEVTISGVKIGTVTSISLNESYTPI
VTMCIQKNILLPSDSSASILNSNMLGKKHIDIELGSDQEVIVSEGLIEHTHSDLSFNAIIAKIIDSLIK

Sequences:

>Translated_149_residues
MHRSNIIEIFIGFLVLAGAISIGIIAFNKLPYKNTLRNCYTVKAFFSNVDGLDIGDEVTISGVKIGTVTSISLNESYTPI
VTMCIQKNILLPSDSSASILNSNMLGKKHIDIELGSDQEVIVSEGLIEHTHSDLSFNAIIAKIIDSLIK
>Mature_149_residues
MHRSNIIEIFIGFLVLAGAISIGIIAFNKLPYKNTLRNCYTVKAFFSNVDGLDIGDEVTISGVKIGTVTSISLNESYTPI
VTMCIQKNILLPSDSSASILNSNMLGKKHIDIELGSDQEVIVSEGLIEHTHSDLSFNAIIAKIIDSLIK

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16181; Mature: 16181

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSNIIEIFIGFLVLAGAISIGIIAFNKLPYKNTLRNCYTVKAFFSNVDGLDIGDEVTI
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE
SGVKIGTVTSISLNESYTPIVTMCIQKNILLPSDSSASILNSNMLGKKHIDIELGSDQEV
CCEEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEE
IVSEGLIEHTHSDLSFNAIIAKIIDSLIK
EHHCCHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHRSNIIEIFIGFLVLAGAISIGIIAFNKLPYKNTLRNCYTVKAFFSNVDGLDIGDEVTI
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE
SGVKIGTVTSISLNESYTPIVTMCIQKNILLPSDSSASILNSNMLGKKHIDIELGSDQEV
CCEEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEE
IVSEGLIEHTHSDLSFNAIIAKIIDSLIK
EHHCCHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA