Click here to switch to the map view.

The map label for this gene is esxB

Identifier: 57652552

GI number: 57652552

Start: 320168

End: 320482

Strand: Direct

Name: esxB

Synonym: SACOL0278

Alternate gene names: 57652552

Gene position: 320168-320482 (Clockwise)

Preceding gene: 57652551

Following gene: 57652553

Centisome position: 11.4

GC content: 39.05

Gene sequence:

>315_bases
ATGGGTGGATATAAAGGTATTAAAGCAGATGGTGGCAAGGTTGATCAAGCGAAACAATTAGCGGCAAAAACAGCTAAAGA
TATTGAAGCATGTCAAAAGCAAACGCAACAGCTCGCTGAGTATATCGAAGGTAGTGATTGGGAAGGACAGTTCGCCAATA
AGGTGAAAGATGTGTTACTCATTATGGCAAAGTTTCAAGAAGAATTAGTACAACCGATGGCTGACCATCAAAAAGCAATT
GATAACTTAAGTCAAAATCTAGCGAAATACGATACATTATCAATTAAGCAAGGGCTTGATAGGGTGAACCCATGA

Upstream 100 bases:

>100_bases
CGATAAAAATAAAGAATCCCTCCAAAAAGCTAAGGAAATTGCTGGCGAAAAGGCAAGTGAATATTTTAATAAAGCAATGA
ATTAATATTGAGGTGAAGAT

Downstream 100 bases:

>100_bases
TGAAAGATGTTAAGCGAATAGATTATTTTTCTTACGAAGAATTAACAATTTTAGGTGGTAGTAAATTGCCTCTCGTAAAT
TTTGAATTGTTTGATCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLLIMAKFQEELVQPMADHQKAI
DNLSQNLAKYDTLSIKQGLDRVNP

Sequences:

>Translated_104_residues
MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLLIMAKFQEELVQPMADHQKAI
DNLSQNLAKYDTLSIKQGLDRVNP
>Mature_103_residues
GGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLLIMAKFQEELVQPMADHQKAID
NLSQNLAKYDTLSIKQGLDRVNP

Specific function: Virulence factor that is important for the establishment of infection in the host

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ESAT-6 (esx) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ESXB_STAAC (Q5HJ84)

Other databases:

- EMBL:   CP000046
- RefSeq:   YP_185173.1
- STRING:   Q5HJ84
- EnsemblBacteria:   EBSTAT00000009491
- GeneID:   3236666
- GenomeReviews:   CP000046_GR
- KEGG:   sac:SACOL0278
- TIGR:   SACOL0278
- eggNOG:   NOG76543
- GeneTree:   EBGT00050000025249
- HOGENOM:   HBG215869
- ProtClustDB:   CLSK884536
- BioCyc:   SAUR93062:SACOL0278-MONOMER
- GO:   GO:0009405
- InterPro:   IPR018921

Pfam domain/function: PF10663 EsxB

EC number: NA

Molecular weight: Translated: 11510; Mature: 11379

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA