Click here to switch to the map view.

The map label for this gene is ywrF [H]

Identifier: 57652399

GI number: 57652399

Start: 2757708

End: 2758319

Strand: Reverse

Name: ywrF [H]

Synonym: SACOL2682

Alternate gene names: 57652399

Gene position: 2758319-2757708 (Counterclockwise)

Preceding gene: 57652400

Following gene: 57652396

Centisome position: 98.18

GC content: 33.99

Gene sequence:

>612_bases
ATGTATACGTTTGATGCACAATCATTAACTGCTAGAGAAAACTATAAATTATTAATTGGTTCAATTATTCCACGACCTAT
AGCTTTTGTTACAACATTAAATCAAGATGCATCAGTAAATGCAGCACCATTTAGCTTTTTTAATATTGTTAATAATCATC
CGCCAATGATTGCTATTGCAGTTCAACGTGCAGGAGGTAAGAGAAAAGATACTGCATTAAATATAGAACGGACTGGAGAC
TTTGTTGTGCATATTACAGACGAAGATAATGTTCAAGATATTAATGAGACTGCAGCGCCGTTAGCATATGGTGACAGTGA
GTTGAGTCGTACAGAATTATCACTTTTAACATCTACAACGATTAAGACGCCAGGAATTAAAGATGCGAAAATGAGATTCG
AATGTAAACTATCGCAAATGATATTGCTTGGAGATGTATTAGATGGGGCTGATTTAATAATAGGTGAAATTGTAACTTAT
CATATTGATGACAGTATTTATGAGGGTGATTTTAAAATCAATCCACACGCATTACAGGCTGTTTCTCGTTTAGCCGGAAA
TGATTATGCTAAATTAGGGGGAATATTTACGATAAAGAGACCAGAAAAATAA

Upstream 100 bases:

>100_bases
TTTGCTAAATAAATACAAGTGATTTTCAGAGGAGAATAGATGTTTAAATTAACCAAAATCGGAGAAATACCTAGATATAC
TTAGAAAAGAGGTAGGTATT

Downstream 100 bases:

>100_bases
TAAAACACATGCTATAGCGGTATACCGTTTATGAATTGAATCAAAAGTACACAGGTGCTAAAGTATGTGCTTCTAAAATG
AAGACTATTTTTTATTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPFSFFNIVNNHPPMIAIAVQRAGGKRKDTALNIERTGD
FVVHITDEDNVQDINETAAPLAYGDSELSRTELSLLTSTTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTY
HIDDSIYEGDFKINPHALQAVSRLAGNDYAKLGGIFTIKRPEK

Sequences:

>Translated_203_residues
MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPFSFFNIVNNHPPMIAIAVQRAGGKRKDTALNIERTGD
FVVHITDEDNVQDINETAAPLAYGDSELSRTELSLLTSTTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTY
HIDDSIYEGDFKINPHALQAVSRLAGNDYAKLGGIFTIKRPEK
>Mature_203_residues
MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPFSFFNIVNNHPPMIAIAVQRAGGKRKDTALNIERTGD
FVVHITDEDNVQDINETAAPLAYGDSELSRTELSLLTSTTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTY
HIDDSIYEGDFKINPHALQAVSRLAGNDYAKLGGIFTIKRPEK

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22316; Mature: 22316

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPFSFFNIVNNHPPMIAIA
CEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHEEHHHCCCCCEEEEE
VQRAGGKRKDTALNIERTGDFVVHITDEDNVQDINETAAPLAYGDSELSRTELSLLTSTT
EECCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCEEECCCHHHHHHHHHHEECE
IKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTYHIDDSIYEGDFKINPHALQA
ECCCCCCCCEEEEEEEHHHEEEEHHCCCCCCEEEEEEEEEEECCCEECCCEEECHHHHHH
VSRLAGNDYAKLGGIFTIKRPEK
HHHHCCCCCHHHCCEEEEECCCC
>Mature Secondary Structure
MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPFSFFNIVNNHPPMIAIA
CEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHEEHHHCCCCCEEEEE
VQRAGGKRKDTALNIERTGDFVVHITDEDNVQDINETAAPLAYGDSELSRTELSLLTSTT
EECCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCEEECCCHHHHHHHHHHEECE
IKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTYHIDDSIYEGDFKINPHALQA
ECCCCCCCCEEEEEEEHHHEEEEHHCCCCCCEEEEEEEEEEECCCEECCCEEECHHHHHH
VSRLAGNDYAKLGGIFTIKRPEK
HHHHCCCCCHHHCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]