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The map label for this gene is yvcP [H]

Identifier: 57652364

GI number: 57652364

Start: 2706663

End: 2707328

Strand: Reverse

Name: yvcP [H]

Synonym: SACOL2646

Alternate gene names: 57652364

Gene position: 2707328-2706663 (Counterclockwise)

Preceding gene: 57652365

Following gene: 57652363

Centisome position: 96.37

GC content: 29.88

Gene sequence:

>666_bases
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAGAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAAAATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Upstream 100 bases:

>100_bases
ACAAATGACACGGAAAGTTCAAATCAAGAGCCGTCATTGCAGCAGGATAAAGAACAAAAAGATAACAAAGGATAATTCAA
TTGAAGGAAGAAGATTATAG

Downstream 100 bases:

>100_bases
GGTGAATGCAATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAA
TGTTTTACCTGTATCATTTG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Sequences:

>Translated_221_residues
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV
>Mature_221_residues
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Specific function: Member of the two-component regulatory system yvcQ/yvcP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=26.5765765765766, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=26.2443438914027, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=29.4117647058824, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=28.7610619469027, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=29.4117647058824, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=27.4774774774775, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=25.4545454545455, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=30.0884955752212, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=26.2222222222222, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI2367329, Length=207, Percent_Identity=28.9855072463768, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=29.0909090909091, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=26.8722466960352, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI145693140, Length=228, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25393; Mature: 25393

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGF
CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCCHH
HWCQEIRKTSNVPIIFISSRIDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYD
HHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCHHHHCCCCCCEEEHHHHHHHHHHHHC
LSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILKLLFQNEDKYVSRTALIEKCW
EEECCCCEEEEEEEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV
CCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGF
CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCCHH
HWCQEIRKTSNVPIIFISSRIDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYD
HHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCHHHHCCCCCCEEEHHHHHHHHHHHHC
LSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILKLLFQNEDKYVSRTALIEKCW
EEECCCCEEEEEEEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV
CCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]