Click here to switch to the map view.

The map label for this gene is crtP

Identifier: 57652301

GI number: 57652301

Start: 2642387

End: 2643880

Strand: Reverse

Name: crtP

Synonym: SACOL2579

Alternate gene names: 57652301

Gene position: 2643880-2642387 (Counterclockwise)

Preceding gene: 57652302

Following gene: 57652300

Centisome position: 94.11

GC content: 35.41

Gene sequence:

>1494_bases
ATGACTAAACATATCATCGTTATTGGTGGTGGCTTAGGTGGGATTTCTGCAGCAATTCGAATGGCACAAAGTGGCTATTC
GGTCTCATTATATGAACAAAATAATCATATAGGAGGCAAAGTGAATCGTCATGAATCAGATGGCTTTGGCTTTGATTTAG
GTCCATCTATTTTAACGATGCCTTATATTTTTGAAAAATTATTCGAATATAGCAAGAAGCAAATGTCAGACTACGTTACA
ATCAAGCGATTGCCACATCAATGGCGTAGCTTTTTTCCAGATGGAACGACTATCGATTTGTATGAAGGTATTAAAGAAAC
AGGTCAGCATAATGCGATATTGTCGAAACAGGATATAGAGGAACTGCAAAATTATTTGAATTATACAAGACGAATCGATC
GTATTACTGAAAAAGGGTATTTCAACTATGGTTTAGATACACTATCTCAAATTATTAAATTTCATGGGCCATTAAATGCT
CTTATTAATTATGATTATGTACATACTATGCAACAGGCCATAGACAAGCGTATCTCGAATCCATACTTGCGACAAATGTT
AGGCTATTTTATCAAATATGTAGGTTCTTCATCATACGATGCGCCAGCTGTATTATCTATGTTATTCCATATGCAACAAG
AGCAAGGCCTTTGGTATGTAGAAGGTGGAATCCATCATTTAGCCAATGCCTTGGAAAAGCTAGCGCGTGAAGAAGGTGTC
ACAATTCATACAGGTGCACGTGTGGACAATATTAAAACATATCAAAGACGTGTGACGGGTGTCAGATTAGATACAGGTGA
GTTTGTAAAGGCAGATTATATTATTTCAAATATGGAAGTCATACCTACTTATAAATATTTAATTCACCTTGATACTCAAC
GATTAAACAAATTAGAGAGGGAATTTGAGCCGGCAAGCTCAGGATATGTGATGCATTTAGGTGTTGCTTGCCAATACCCG
CAATTAGCACATCATAATTTCTTTTTTACGGAAAATGCTTATCTCAATTATCAACAAGTTTTTCATGAAAAGGTATTGCC
AGATGATCCGACCATTTATCTAGTAAATACGAATAAAACTGATCACACACAAGCGCCAGTAGGTTATGAAAATATCAAAG
TCTTACCACATATTCCATATATTCAAGATCAGCCTTTTACCACTGAAGATTATGCGAAGTTTAGGGATAAAATTTTGGAT
AAATTAGAAAAAATGGGACTTACTGATTTAAGAAAACACATTATTTATGAAGATGTTTGGACACCGGAGGATATTGAAAA
AAATTATCGTTCTAATCGTGGTGCAATATATGGTGTTGTAGCAGATAAAAAGAAAAACAAAGGATTTAAATTTCCTAAAG
AAAGTCAGTATTTTGAAAACTTGTACTTTGTAGGTGGATCAGTAAATCCTGGTGGTGGCATGCCAATGGTTACATTAAGT
GGGCAACAAGTCGCAGACAAAATAAACGCGCGAGAAGCGAAGAATAGGAAGTGA

Upstream 100 bases:

>100_bases
TATGCAATGATAGCTAATGTTCCAATCATTATTGTGCAACGCTATAATCGACCGAGATTAACGCAGTTACTACGCATATT
AAAACGAAGAGGTGAACGTC

Downstream 100 bases:

>100_bases
TATCTATGAAATGGTTATCACGAATATTAACAGTAATAGTGACCATGTCTATGGCGTGTGGTGCATTGATATTTAATCGT
AGACATCAGCTAAAGGCGAA

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMSDYVT
IKRLPHQWRSFFPDGTTIDLYEGIKETGQHNAILSKQDIEELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNA
LINYDYVHTMQQAIDKRISNPYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV
TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLEREFEPASSGYVMHLGVACQYP
QLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYLVNTNKTDHTQAPVGYENIKVLPHIPYIQDQPFTTEDYAKFRDKILD
KLEKMGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIYGVVADKKKNKGFKFPKESQYFENLYFVGGSVNPGGGMPMVTLS
GQQVADKINAREAKNRK

Sequences:

>Translated_497_residues
MTKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMSDYVT
IKRLPHQWRSFFPDGTTIDLYEGIKETGQHNAILSKQDIEELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNA
LINYDYVHTMQQAIDKRISNPYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV
TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLEREFEPASSGYVMHLGVACQYP
QLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYLVNTNKTDHTQAPVGYENIKVLPHIPYIQDQPFTTEDYAKFRDKILD
KLEKMGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIYGVVADKKKNKGFKFPKESQYFENLYFVGGSVNPGGGMPMVTLS
GQQVADKINAREAKNRK
>Mature_496_residues
TKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMSDYVTI
KRLPHQWRSFFPDGTTIDLYEGIKETGQHNAILSKQDIEELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNAL
INYDYVHTMQQAIDKRISNPYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGVT
IHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLEREFEPASSGYVMHLGVACQYPQ
LAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYLVNTNKTDHTQAPVGYENIKVLPHIPYIQDQPFTTEDYAKFRDKILDK
LEKMGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIYGVVADKKKNKGFKFPKESQYFENLYFVGGSVNPGGGMPMVTLSG
QQVADKINAREAKNRK

Specific function: Catalyzes the oxidation of the terminal methyl side group of 4,4'-diaponeurosporene to form 4,4'-diaponeurosporenoate (4,4'-diaponeurosporenic acid), via the aldehyde intermediate 4,4'-diaponeurosporenal. This is an intermediate step in the biosynthesis o

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtP subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CRTP_STAA3 (Q2FDU3)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_495135.1
- ProteinModelPortal:   Q2FDU3
- STRING:   Q2FDU3
- EnsemblBacteria:   EBSTAT00000036621
- GeneID:   3913071
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_2501
- eggNOG:   COG1233
- GeneTree:   EBGT00050000023975
- HOGENOM:   HBG735114
- OMA:   VEESACV
- ProtClustDB:   CLSK886074
- GO:   GO:0015979
- InterPro:   IPR002937
- InterPro:   IPR014105
- TIGRFAMs:   TIGR02734

Pfam domain/function: PF01593 Amino_oxidase

EC number: NA

Molecular weight: Translated: 57188; Mature: 57057

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTM
CCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
PYIFEKLFEYSKKQMSDYVTIKRLPHQWRSFFPDGTTIDLYEGIKETGQHNAILSKQDIE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCHHHHH
ELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNALINYDYVHTMQQAIDKRISN
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCC
PYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCC
TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER
EEEECCCCCHHHHHHHHHCEEEECCCCEEEHHHEEECCEEEEEEEEEEEECHHHHHHHHH
EFEPASSGYVMHLGVACQYPQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYLVNTNKT
HCCCCCCCEEEEECCEECCCHHHCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCC
DHTQAPVGYENIKVLPHIPYIQDQPFTTEDYAKFRDKILDKLEKMGLTDLRKHIIYEDVW
CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
TPEDIEKNYRSNRGAIYGVVADKKKNKGFKFPKESQYFENLYFVGGSVNPGGGMPMVTLS
CCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCEEEEEC
GQQVADKINAREAKNRK
CHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTM
CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
PYIFEKLFEYSKKQMSDYVTIKRLPHQWRSFFPDGTTIDLYEGIKETGQHNAILSKQDIE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCHHHHH
ELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNALINYDYVHTMQQAIDKRISN
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCC
PYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCC
TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER
EEEECCCCCHHHHHHHHHCEEEECCCCEEEHHHEEECCEEEEEEEEEEEECHHHHHHHHH
EFEPASSGYVMHLGVACQYPQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYLVNTNKT
HCCCCCCCEEEEECCEECCCHHHCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCC
DHTQAPVGYENIKVLPHIPYIQDQPFTTEDYAKFRDKILDKLEKMGLTDLRKHIIYEDVW
CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
TPEDIEKNYRSNRGAIYGVVADKKKNKGFKFPKESQYFENLYFVGGSVNPGGGMPMVTLS
CCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCEEEEEC
GQQVADKINAREAKNRK
CHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA