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The map label for this gene is cap5L [H]

Identifier: 57651164

GI number: 57651164

Start: 164775

End: 165980

Strand: Direct

Name: cap5L [H]

Synonym: SACOL0147

Alternate gene names: 57651164

Gene position: 164775-165980 (Clockwise)

Preceding gene: 57651163

Following gene: 57651165

Centisome position: 5.87

GC content: 35.07

Gene sequence:

>1206_bases
ATGAGTGAAAAAAAGATTTTGATTTTATGTCAGTATTTTTATCCGGAATATGTATCTTCTGCGACGTTACCAACTCAATT
GGCGGAAGATTTAATTGCGAATCACATTAATGTCGATGTCATGTGTGGATGGCCATATGAATATAGTAATCATAAACAGG
TTTCTAAAACCGAGATGCATCGTGGTATTCGCATTCGACGTCTCAAGTATTCGAGGTTTAATAACAAAAGTAAGGTTGGA
AGGATCATCAATTTCTTTAGTTTATTTTCAAAATTCGTGATTAATATACCTAAAATGTTGAAATATGATCAGATTCTTGT
TTACTCTAATCCACCAATCTTGCCATTAATACCAGACGTTTTACACAGACTGCTTAAGAAAAAATATTCTTTTGTGGTGT
ATGATATAGCACCTGATAATGCGATTAAGACAGGTGCAACTCGTCCAGGTAGCATGATTGATAAGCTGATGCGTTACATT
AATAGACATGTCTACAAGAATGCTGAAAATGTCATTGTCCTTGGTACGGAAATGAAAAACTACTTACTAAATCATCAAAT
TTCTAAAAATGCTGACAATATCCATGTGATTCCTAACTGGTATGACATGCGTCAATTACAAGACAATCGTATCTATAATG
ACACATTTAAAGCTTACCGTGAGCAATACGACAAAATTTTATTGTATAGCGGTAATATGGGGCAGTTACAGGATATGGAG
ACACTTATCTCATTTTTAAAATTAAATAAGGATCAGTCTCAAACGTTAACAATACTTTGTGGTCATGGTAAGAAATTTGC
AGATGTCAAAACGGCAATAGAAGACCATCGTATTGAAAATGTTAAAATGTTTGAGTTTTTAACAGGTACAGACTATGCTG
ACGTATTAAAAATTGCGGATGTATGTATTGCATCGCTGATTAAAGAAGGCGTCGGTTTAGGCGTGCCGAGCAAGAATTAT
GGCTATCTTGCAGCTAAGAAAGCGTTGGTACTCATCATGGATAAGCAATCTGATATCGTTCAACATGTTGAACAATATGA
TGCGGGTATCCAAATTGATAATGGCGATGCACATGCCATTTATAACTTCATCAACACTCACTCGAGTAAGGAATTGCACG
AGATGGGTGAGCGCGCACATCAACTGTTTAAAGATAAATATACGAGAGAAATTAATACTATGAAGTATTACAATCTGTTG
AAGTGA

Upstream 100 bases:

>100_bases
ATTCTTTTGGACAACGCTGTTCAGCAACATTATTAAGTATGTGATTTTAAATATTATAGGTTTAAAGTCTAAATTCATTA
ATAAAAAGGACGTCGATTAG

Downstream 100 bases:

>100_bases
GGAGATAATTATGAAGCGATTATTCGATGTAGTGAGTTCAATATATGGTTTAGTAGTTTTAAGTCCGATTCTGTTAATTA
CAGCATTACTAATTAAAATG

Product: capsular polysaccharide biosynthesis protein Cap5L

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVG
RIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYI
NRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNY
GYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLL
K

Sequences:

>Translated_401_residues
MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVG
RIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYI
NRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNY
GYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLL
K
>Mature_400_residues
SEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGR
IINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYIN
RHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDMET
LISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYG
YLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 46578; Mature: 46446

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMH
CCCCEEEEEEEHHCHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHH
RGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDV
CCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCHHHH
LHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKN
HHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHH
YLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
HHHHCHHCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEECCCCCHHHHH
TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIAD
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
VCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAI
HHHHHHHHHHCCCCCCCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCEEECCCCHHHH
YNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMH
CCCEEEEEEEHHCHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHH
RGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDV
CCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCHHHH
LHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKN
HHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHH
YLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
HHHHCHHCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEECCCCCHHHHH
TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIAD
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
VCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAI
HHHHHHHHHHCCCCCCCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCEEECCCCHHHH
YNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10400585; 10828401; 12057956 [H]