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The map label for this gene is oppB [H]

Identifier: 57650179

GI number: 57650179

Start: 997700

End: 998548

Strand: Direct

Name: oppB [H]

Synonym: SACOL0991

Alternate gene names: 57650179

Gene position: 997700-998548 (Clockwise)

Preceding gene: 57650178

Following gene: 57650180

Centisome position: 35.51

GC content: 34.16

Gene sequence:

>849_bases
ATGAAATTAATGCCAGGTTCGCCATTTAACGATGCTAAATTAAATGCTGAACAAAAAGAAATTTTAAATGAAAAATATGG
ATTAAATGATCCTGTAGCTACGCAGTATTTACATTATTTAAAAAATGTTGTTACAGGCGATTTTGGTAATTCATTCCAGT
ATCATAATCAACCTGTGTGGGATTTGATTAAACCGAGACTACTACCTTCTTTTGAAATGGGTCTTACAGCAATGTTCATC
GGTGTGATACTGGGACTTATTTTAGGTGTTGCAGCAGCTACTAAACAAAATTCTTGGGTTGACTATACAACTACAGTTAT
TTCAGTTATTGCAGTATCTGTACCATCTTTTGTACTTGCTGTACTTTTACAATATGTATTTGCAGTTAAATTAAGATGGT
TCCCAGTAGCTGGATGGGAAGGTTTTTCGACCGCGGTATTACCGTCACTTGCATTATCTGCAGCTGTTTTAGCAACTGTC
GCCAGATACATAAGAGCAGAGATGATAGAGGTATTAAGTTCAGACTATATTTTATTAGCGAGAGCTAAAGGTAATTCGAC
AATGCGTGTACTTTTTGGACATGCACTTAGAAATGCTTTAATTCCAATTATTACAATTATCGTTCCCATGTTAGCAAGTA
TTTTAACAGGCACTTTAACAATTGAAAATATTTTTGGAGTTCCTGGATTAGGGGATCAATTCGTACGTTCAATTACAACA
AATGATTTCTCAGTAATCATGGCAATCACACTATTATTTAGCACACTGTTTATCGTTTCTATTTTTATTGTAGATATTTT
GTACGGTGTGATAGATCCACGAATTCGTGTTCAAGGAGGTAAAAAATAA

Upstream 100 bases:

>100_bases
ATTTGTTAGAGGAGGGGATTAGATGGGGAAATATATTTTCAAACGATTTATTTATATGCTTATTTCTTTATTTATTATTA
TTACAATTACATTTTTCTTA

Downstream 100 bases:

>100_bases
TGGCTGAAAATAAAAACAATTTGTCGATTAACGACGATCATTCTAATGCAGCTATGACGCATACCTCTGACGCTATCGCA
TCATCTGATTTTATTATTAG

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKLMPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLTAMFI
GVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWFPVAGWEGFSTAVLPSLALSAAVLATV
ARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITT
NDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK

Sequences:

>Translated_282_residues
MKLMPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLTAMFI
GVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWFPVAGWEGFSTAVLPSLALSAAVLATV
ARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITT
NDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK
>Mature_282_residues
MKLMPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLTAMFI
GVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWFPVAGWEGFSTAVLPSLALSAAVLATV
ARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITT
NDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=279, Percent_Identity=44.4444444444444, Blast_Score=234, Evalue=7e-63,
Organism=Escherichia coli, GI1787053, Length=280, Percent_Identity=39.6428571428571, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1789965, Length=310, Percent_Identity=32.5806451612903, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789888, Length=256, Percent_Identity=34.375, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1787761, Length=315, Percent_Identity=30.4761904761905, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1788504, Length=284, Percent_Identity=26.4084507042254, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=26.3940520446097, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30928; Mature: 30928

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVW
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
DLIKPRLLPSFEMGLTAMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLLQYVFAVKLRWFPVAGWEGFSTAVLPSLALSAAVLATVARYIRAEMIEVLSSDYILLA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
RAKGNSTMRVLFGHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
NDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
>Mature Secondary Structure
MKLMPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVW
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
DLIKPRLLPSFEMGLTAMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLLQYVFAVKLRWFPVAGWEGFSTAVLPSLALSAAVLATVARYIRAEMIEVLSSDYILLA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
RAKGNSTMRVLFGHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
NDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]