| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is norA [H]
Identifier: 57238694
GI number: 57238694
Start: 1745505
End: 1746776
Strand: Direct
Name: norA [H]
Synonym: CJE1855
Alternate gene names: 57238694
Gene position: 1745505-1746776 (Clockwise)
Preceding gene: 57238687
Following gene: 57236894
Centisome position: 98.18
GC content: 31.45
Gene sequence:
>1272_bases ATGAATGACAAAACTTATAAATTTCATCCAAATGACACAAAAATGGATAAAAAAATAATTCAAATTACTGAAAAGTCCGG ATTTAAAGCAGCTGTGTTTTCTATGGCTGCTATGACTATGCTAGGAAGTGTGGTCATTTCATCTGCTCTGCCTGCTATCA ATAGACATTTTGAAGAACTTTTAACCCAAAGTGGCGCTACTCTTGCTTCAAGTTTCACATTAGCTCATCTTGATATACTT GTTCGCTTAGTTTTAACCATCCCTGCTATTTTTGTTGTCATTTTATCTCCATTTGCTGGTATTTTAATGGATAAATTTGG CAAATTAAAATTCATTCTTCCAGCTATGGTGGTTTGGACTATTTCTGGGATAAGTGGCTTTTTCTTAAATGATATTTATG CTATACTGACTTCAAGAGCTATTTTTGGTATGGCAACTGCTTTTATAATGACAGGCGCTTCGGCTTTGCTTGGGGATTAT TATAGTCGTGGTGGCTTTAATCGCAGAGAAAATGCTTTAAGTCTTCAAGGATTTTTTTGTGCGGTAGGGGGTGCTGTTTT TATTTCTATTGCGGGATTTGTTTCAAGTTATTCTTGGCGTTATCCTTTTTTGGTATATGGACTTGGAATTTTAATTACCT TAATGGCTATCATTTATCTTTTTGAACCTAGAAAATTTAAATTCTATAATCATACAAAAATAGAAACAAAAACAAATTAT TGGCAATTTTTCCCTATCTATTTTATAGGTTTTTTTATCATGGTAGTTTATTATATTTCGCCAACTCAACTTCCTTACTA TATAGAAGAACATTTGGGATTGGATCCTAAATATATAGGTATTTCGATGTCTGTATCTGCACTATGTTATGGTTTTTTCT CTCTAAGCTATAGATATATTATAAAATTCTTAAGTATTAAAACTATTTATGTTTTAACTCTTTTTATCGTATCTTGTTCT TTTTTGCTGCTTTTTTTAGTAGATAGCTTTTTCACAGTTTTAATCGCCTTAGCTTTGCTTGGAATGGGTGGAGGTATTAT GCTTGTAAATAATACGGCTTATCTTTTTTCAATCTGTCCTGAAAATGCTCGCTCTAGGGCTTATGGAATTTTAGCAAGTT GTATATTTTTAGGACAATTTTTAAGTCCTATTATCTCTCAACCTATCGTTAGACAAATGGGTCTTGTAGATGCTTTTTTA ATATGGTCAATAGTAATTTTTATAGTGTGCATTGTGTTTTTATTTTTAAAGCAAAAACCTAGAATAAATTAG
Upstream 100 bases:
>100_bases AACAAAACTATCATAACAAAATAAATAAAATATAATTTTAAGTAATTTTAAATACAAACCATAATTTTTGGAGTATAATA AAATAAAAAAGGTAAAAATT
Downstream 100 bases:
>100_bases CAAGAAAAATCTTGCTAATTTTATTTATTACAAACCTACCGCACTTAAAGTTTGGTATTTACTCATATAAATTTGAGCTT CAATTTTTCTCATCGTATCA
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MNDKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEELLTQSGATLASSFTLAHLDIL VRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWTISGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIETKTNY WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCS FLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICPENARSRAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFL IWSIVIFIVCIVFLFLKQKPRIN
Sequences:
>Translated_423_residues MNDKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEELLTQSGATLASSFTLAHLDIL VRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWTISGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIETKTNY WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCS FLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICPENARSRAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFL IWSIVIFIVCIVFLFLKQKPRIN >Mature_423_residues MNDKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEELLTQSGATLASSFTLAHLDIL VRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWTISGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIETKTNY WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCS FLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICPENARSRAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFL IWSIVIFIVCIVFLFLKQKPRIN
Specific function: Involved in quinolone resistance. May constitute a membrane-associated active efflux pump of hydrophilic quinolones [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47487; Mature: 47487
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEEL CCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ISGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDYYSRGGFNRRENALSLQGFFC HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIETKTNY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCC WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRYI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH IKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECC ENARSRAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFLIWSIVIFIVCIVFLFLKQKP CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RIN CCC >Mature Secondary Structure MNDKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEEL CCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ISGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDYYSRGGFNRRENALSLQGFFC HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIETKTNY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCC WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRYI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH IKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECC ENARSRAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFLIWSIVIFIVCIVFLFLKQKP CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RIN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA