| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238639
Identifier: 57238639
GI number: 57238639
Start: 1696300
End: 1697043
Strand: Reverse
Name: 57238639
Synonym: CJE1799
Alternate gene names: NA
Gene position: 1697043-1696300 (Counterclockwise)
Preceding gene: 57238642
Following gene: 57238638
Centisome position: 95.46
GC content: 25.54
Gene sequence:
>744_bases ATGACTATAGATTTAAATCACAATTTTACCTCTTTTGTTCTTCTTGATGAAGTTGATTTTAATTTTTCGGAGTTAAAAAG CATTTTAGAAGATAAATTTAATATAAAAATAGCTGATGAAAATTTTACCAAAGAGGGAGTGATTTTTTCATATGAAAATA TGTTGATTACTCTAAATTTGATTAAAAATCCTATACCTAATCACGAAGCAGAATACTATGCAAATTTTAATTTTATGTGG AAAGATGCCTTAGAGCAAACTAAAAAACATAAAGCTCATCTTCTTATAGCGGTGCTAAGTCAAGATCAAAGCAAATTAGA ACAAGCTAAAATGTTTACGAAAATTGCAGCTTTATGTTTGGATAATAAACATGCTTTAGGTTTTTATACAGGTGCAGTTG TTTTAGAGCCCAGTTTTTATATAGAAAATGCAAAAATGTTAGATGATAATTGCTTGCCGGTATATAATTGGATATATGTT AGTGTTTATCCTAGTGAAAATGGAGTTAATGCTTATACTTATGGGCTTAGAAATTTTGATAAATTAGAACTTGAAGTTTG TGATTTAAACATAGAAGAAAAAGAACTTTTCTTTTGTATTTATGATATTGTTTTGCATATTTTAACTTATGATATTAATC TAAAAGATAAAGATATTTTAAAATTTGAAGATGGAAAAGAAATAAAATTTATAAAAAGCCAAGGTATAAGTGTTGAGAAT GAAAGCTTGAAAATTATTTTTTAA
Upstream 100 bases:
>100_bases TTTATAATTAATATCAATTATCATAATTTTTAAGAAATTCTTGTTTATAGTTTTTATTTTTATTAGGTTATAATTTATAA AAATTTAAATAGGATTTAAC
Downstream 100 bases:
>100_bases GTTTCACATTCACTTCACAGTTTTGAGTTAAACTTTCGCCAACCAAGACAAAAAAAGGAGAAATTATGAAAGCAAAACTA ACTTTACTTGCTTTGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTIDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEGVIFSYENMLITLNLIKNPIPNHEAEYYANFNFMW KDALEQTKKHKAHLLIAVLSQDQSKLEQAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNCLPVYNWIYV SVYPSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDILKFEDGKEIKFIKSQGISVEN ESLKIIF
Sequences:
>Translated_247_residues MTIDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEGVIFSYENMLITLNLIKNPIPNHEAEYYANFNFMW KDALEQTKKHKAHLLIAVLSQDQSKLEQAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNCLPVYNWIYV SVYPSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDILKFEDGKEIKFIKSQGISVEN ESLKIIF >Mature_246_residues TIDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEGVIFSYENMLITLNLIKNPIPNHEAEYYANFNFMWK DALEQTKKHKAHLLIAVLSQDQSKLEQAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNCLPVYNWIYVS VYPSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDILKFEDGKEIKFIKSQGISVENE SLKIIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28764; Mature: 28633
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEGVIFSYENMLITLNL CEEECCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEEEEEE IKNPIPNHEAEYYANFNFMWKDALEQTKKHKAHLLIAVLSQDQSKLEQAKMFTKIAALCL CCCCCCCCCCEEEEECEEEEHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHC DNKHALGFYTGAVVLEPSFYIENAKMLDDNCLPVYNWIYVSVYPSENGVNAYTYGLRNFD CCCCEEEEEEEEEEECCCEEECCCEEECCCCCEEEEEEEEEEEECCCCCCEEEECCCCCC KLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDILKFEDGKEIKFIKSQGISVEN EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCEEEC ESLKIIF CCEEEEC >Mature Secondary Structure TIDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEGVIFSYENMLITLNL EEECCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEEEEEE IKNPIPNHEAEYYANFNFMWKDALEQTKKHKAHLLIAVLSQDQSKLEQAKMFTKIAALCL CCCCCCCCCCEEEEECEEEEHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHC DNKHALGFYTGAVVLEPSFYIENAKMLDDNCLPVYNWIYVSVYPSENGVNAYTYGLRNFD CCCCEEEEEEEEEEECCCEEECCCEEECCCCCEEEEEEEEEEEECCCCCCEEEECCCCCC KLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDILKFEDGKEIKFIKSQGISVEN EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCEEEC ESLKIIF CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA