| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238626
Identifier: 57238626
GI number: 57238626
Start: 1681006
End: 1681761
Strand: Reverse
Name: 57238626
Synonym: CJE1785
Alternate gene names: NA
Gene position: 1681761-1681006 (Counterclockwise)
Preceding gene: 57238632
Following gene: 57238619
Centisome position: 94.6
GC content: 31.22
Gene sequence:
>756_bases ATGAATTTTGAAAGCATTATTTCTCATATGAATGATCATCATAAATCAAATTTGGTTGATCTTTGTAAAAAATTTGGTGG TATTGAGCAAGTACAAGATGTTTTTCTAAAAAGTGTTGATTTTAATGGCTTGGATCTTGTTTACAATGATAAAGAAAATT TACGAGTGGAATTTCCTAAAAAAGCCGATGAAAACACGATTAAAGATACTATAATATCCCTTTGCATGAGTGCAAAGAGT GAGCAAAATTTTAGTGGCGTAGAAAAAGAATTAAATGAATTTATGCTAAGTTTTAATTCTGTAGCTTTGGCAACTTTAAA TGCAAATGGAGAAGTTGTTTGCTCGTATGCACCTTTTGTAAGCACACAATGGGGAAATTATATTTATATAAGTGAAGTAA GCGAACATTTTAACAACATCAAAGTAAATCCAAACAATATAGAAATAATGTTTTTAGAGGATGAGAGTAAAGCCGCTTCT GTGATACTTCGCAAAAGATTGCGCTATAGAGTAAATGCAAGCTTTTTAGAGAGAGGTGAAAGATTTGATCAAATTTATGA TGAGTTTGAAAAACAAACCGGAGGAGAAGGAGGCATTAAAACTATACGCAAGATGCTTGATTTTCATCTAGTAAAGCTTG AATTTAAAAAAGGACGCTTTGTAAAAGGTTTTGGTCAAGCTTATGATATAGAAAATGGAAATGTTACACATGTAGGTGCT AGTGGAAATCCACATAAATTCCTACATAAGCATTAA
Upstream 100 bases:
>100_bases TTTGTTAAAATAGATAATTTTTATATTTTAAGTTATTTTTAATTTGATAATTGATACCATTTTTTTTAATATTTTATTTT AAAATCAAGAAAGGATAAAA
Downstream 100 bases:
>100_bases TTTATATAAAATCTTATAAATTTTGTTCTTGTAAAGCTTGGGCTTGATGATGAGTGATTAAAGGTTCTATGATTTCATCA AAAAGCCCATCTTGCATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYNDKENLRVEFPKKADENTIKDTIISLCMSAKS EQNFSGVEKELNEFMLSFNSVALATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAAS VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQAYDIENGNVTHVGA SGNPHKFLHKH
Sequences:
>Translated_251_residues MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYNDKENLRVEFPKKADENTIKDTIISLCMSAKS EQNFSGVEKELNEFMLSFNSVALATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAAS VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQAYDIENGNVTHVGA SGNPHKFLHKH >Mature_251_residues MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYNDKENLRVEFPKKADENTIKDTIISLCMSAKS EQNFSGVEKELNEFMLSFNSVALATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAAS VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQAYDIENGNVTHVGA SGNPHKFLHKH
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 28703; Mature: 28703
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYNDKENLRVEFPK CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCC KADENTIKDTIISLCMSAKSEQNFSGVEKELNEFMLSFNSVALATLNANGEVVCSYAPFV CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCE STQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAASVILRKRLRYRVNASFLERGE ECCCCCEEEEEEHHHHHCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHH RFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQAYDIENGNVTHVGA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCCCEEECCCCCEEEECC SGNPHKFLHKH CCCCCCCCCCC >Mature Secondary Structure MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYNDKENLRVEFPK CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCC KADENTIKDTIISLCMSAKSEQNFSGVEKELNEFMLSFNSVALATLNANGEVVCSYAPFV CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCE STQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAASVILRKRLRYRVNASFLERGE ECCCCCEEEEEEHHHHHCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHH RFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQAYDIENGNVTHVGA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCCCEEECCCCCEEEECC SGNPHKFLHKH CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]