| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238562
Identifier: 57238562
GI number: 57238562
Start: 1614560
End: 1615456
Strand: Reverse
Name: 57238562
Synonym: CJE1715
Alternate gene names: NA
Gene position: 1615456-1614560 (Counterclockwise)
Preceding gene: 57238563
Following gene: 57238557
Centisome position: 90.87
GC content: 29.43
Gene sequence:
>897_bases TTGACTCGAACAAAGTATTTGTATATCTTGCTTGTTATTGCTATGTTTTTATGGGGCTCATCTTGGCCAACATCTAAGAT TTTAGTAAATTATACGGATACTTCTATTATTACCTTTTGGCGTTTTTTCTTTGTTGTATTGGGTTCATTTTTTGTTTTAA ACTTCTTAAAAATTCCTCTTAAAATCGAAAAAACTGCCTTAAAATGGGTATTGATAGCAGGAGTTTTAAATGGGCTTTAT GCCTTTGTATTTTTTATCGCTATAAAGCACGGCTTGGCAGGCAAAGGAGGAGTTTTAGTAACCACTATGATTCCTATTTT TTCTTATTTGATATTTATGATAGCGATATTTTTTCAAAAAAACAAAAAATCAACTCACAAGATCACAAAGAGTGAAATTC TAGGCTTATTTTTAGGTTTATTATCTGGATTTTGTTTGCTAAATTTAGGGAGTTTAGAAGATTTATTTGGTAAATTTAAT ATTTTATTTTTAACTTGTTCTTTTATTTGGGCTTTGATAGCAGTGTTTAATCATAAAGCCAAAGGAGCTCACCCTTTGGC GATTAACTTTTATATTAATCTCATTTCTGTTTTAATGTTTTCTTGGGTATTGTTTGATGTAAAAAGTTATGAAATTTTTC ATTTTGAATTTAAATTTTGGATCAGTATGTTTGTCGTGGCTTTTTTATCAACTATTATAGGAACTAGTATTTATTATTAT GGGATTCACATTTTAGGAAGCGTTAAGGCAAATTCTTTTGTTTTAATCACTCCTGCTAGTGCTTTAATTTGCAGTTATTT TATACTAGACGAGGTGCCAAATGCACTTACCTTGTTAGGTTGTGCCTTGGCTATAGGTGCTATATATTTTATCAATATTT ATGGTAAAAAAGCTTAG
Upstream 100 bases:
>100_bases TGGTAAAAAATCCTCAAGTGGAAAAATATCTAAACGAGTATGAACTACACTTGAAAAAAATTTTTTAAAAAATTTGACTT AAAAATTTCAAGGTGTAACA
Downstream 100 bases:
>100_bases ATTAAATTTTCAAAATCAAGATTGATTTTTTGATCCATAGCTTTAAATTTCATTTCTCTTTGTTTATAAAGTTCTAAGGC TTCTTGCATGCTAATGCTTT
Product: integral membrane protein
Products: NA
Alternate protein names: Permease DMT Family; Integral Membrane Domain-Containing Protein; Drug/Metabolite Transporter
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTRTKYLYILLVIAMFLWGSSWPTSKILVNYTDTSIITFWRFFFVVLGSFFVLNFLKIPLKIEKTALKWVLIAGVLNGLY AFVFFIAIKHGLAGKGGVLVTTMIPIFSYLIFMIAIFFQKNKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFN ILFLTCSFIWALIAVFNHKAKGAHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFKFWISMFVVAFLSTIIGTSIYYY GIHILGSVKANSFVLITPASALICSYFILDEVPNALTLLGCALAIGAIYFINIYGKKA
Sequences:
>Translated_298_residues MTRTKYLYILLVIAMFLWGSSWPTSKILVNYTDTSIITFWRFFFVVLGSFFVLNFLKIPLKIEKTALKWVLIAGVLNGLY AFVFFIAIKHGLAGKGGVLVTTMIPIFSYLIFMIAIFFQKNKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFN ILFLTCSFIWALIAVFNHKAKGAHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFKFWISMFVVAFLSTIIGTSIYYY GIHILGSVKANSFVLITPASALICSYFILDEVPNALTLLGCALAIGAIYFINIYGKKA >Mature_297_residues TRTKYLYILLVIAMFLWGSSWPTSKILVNYTDTSIITFWRFFFVVLGSFFVLNFLKIPLKIEKTALKWVLIAGVLNGLYA FVFFIAIKHGLAGKGGVLVTTMIPIFSYLIFMIAIFFQKNKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFNI LFLTCSFIWALIAVFNHKAKGAHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFKFWISMFVVAFLSTIIGTSIYYYG IHILGSVKANSFVLITPASALICSYFILDEVPNALTLLGCALAIGAIYFINIYGKKA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33692; Mature: 33561
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTKYLYILLVIAMFLWGSSWPTSKILVNYTDTSIITFWRFFFVVLGSFFVLNFLKIPL CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC KIEKTALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTTMIPIFSYLIFMIAIFFQK EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFNILFLTCSFIWALIAVFNHKA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KGAHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFKFWISMFVVAFLSTIIGTSIYYY CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH GIHILGSVKANSFVLITPASALICSYFILDEVPNALTLLGCALAIGAIYFINIYGKKA HHHHEEEECCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCC >Mature Secondary Structure TRTKYLYILLVIAMFLWGSSWPTSKILVNYTDTSIITFWRFFFVVLGSFFVLNFLKIPL CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC KIEKTALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTTMIPIFSYLIFMIAIFFQK EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFNILFLTCSFIWALIAVFNHKA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KGAHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFKFWISMFVVAFLSTIIGTSIYYY CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH GIHILGSVKANSFVLITPASALICSYFILDEVPNALTLLGCALAIGAIYFINIYGKKA HHHHEEEECCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA