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The map label for this gene is ybgL [C]

Identifier: 57238559

GI number: 57238559

Start: 1612100

End: 1612867

Strand: Direct

Name: ybgL [C]

Synonym: CJE1712

Alternate gene names: 57238559

Gene position: 1612100-1612867 (Clockwise)

Preceding gene: 57238558

Following gene: 57238560

Centisome position: 90.68

GC content: 33.98

Gene sequence:

>768_bases
ATGTTCAAAGTGGATTTAAATAGTGATTTAGGGGAAAGTTTTGGCGCCTATAAAATGGGAATGGATGAAGAAATTTTAAA
ATTTGTAAGTTCAGTAAATGTCGCTTGTGGCTTTCATGCGGGTGATCCTTGCGTGATGGATGAAACCTTAAATTTAGCCA
AGCAAAATGGTGTTTGCATAGGAGCACATCCATCTTATCCTGATCTTTTGGGTTTTGGAAGACGCAATATGCAAATAAGC
TTTGAAGAGGCTAAAAACTATGCCTTGTATCAACTAGGAGCTTTATTTGGCTTTGCTAAGGCAAAAGGTATGAAAATACA
GCATTGTAAAGCCCATGGGGCGCTTTATAATATGGCAGCTATTGATGAAAATTTAGCCTTAGCACTTTGTGAGGCAGTGG
CGAGTTTTGATGAAAATATTATTTTTCTAGGGCTTAGTAATTCTGCTATGAATGAAGCAGCTAAGAAAAAGGGTTTAAGA
TATGCTAATGAAGTTTTTGCGGATCGTGCCTATAATGATGATGGCACTTTAGTTTCAAGAAAATTAGAAGGGGCGTTAAT
ACACGATGAAAATTTAGCTATCAAACGCGTGATAAAAATGATAAAAGAAAGCAAAGTTACAAGCATAAATGGCAAAGAAA
TTGATTTAAAAGCCGATAGTATTTGTGTTCATGGGGATAATGCAAAAGCTTTAGAATTTGTTAAAAAAATCAAAGAAAAT
TTAAAAAAAGAGCAAATTCAAATTTGTGCTTTGGAAAATTTTATATAA

Upstream 100 bases:

>100_bases
CTTATTGTAACTTTTTTATTTATTTTTCAAAACTTTTAGTTTATTTAAAATTCTTCTTTAGATATAATAAAATCAATAAT
TAAATATACAAGGTCAAATA

Downstream 100 bases:

>100_bases
GTTTTAGCAATGTTTAGTGTGCATTTTAGTGGAAGTAAAGCTTTGCTTTTGCGTTTTGAGCAAGAAATTTCACCTCAAAT
CAATGCCTATGTTTTAAGCA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDETLNLAKQNGVCIGAHPSYPDLLGFGRRNMQIS
FEEAKNYALYQLGALFGFAKAKGMKIQHCKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNAKALEFVKKIKEN
LKKEQIQICALENFI

Sequences:

>Translated_255_residues
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDETLNLAKQNGVCIGAHPSYPDLLGFGRRNMQIS
FEEAKNYALYQLGALFGFAKAKGMKIQHCKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNAKALEFVKKIKEN
LKKEQIQICALENFI
>Mature_255_residues
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDETLNLAKQNGVCIGAHPSYPDLLGFGRRNMQIS
FEEAKNYALYQLGALFGFAKAKGMKIQHCKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNAKALEFVKKIKEN
LKKEQIQICALENFI

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=42.9718875502008, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 28041; Mature: 28041

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDETLNLAKQNGVCI
CEEEECCCCHHHCCCCHHCCCCHHHHHHHHHCCCEEECCCCCCEEHHHHHHHHHHCCEEE
GAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAKGMKIQHCKAHGALYNMAA
ECCCCCHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHH
IDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLRYANEVFADRAYNDDGTLVSR
HCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEHH
KLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNAKALEFVKKIKEN
HHCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCHHHHHHHHHHHHH
LKKEQIQICALENFI
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDETLNLAKQNGVCI
CEEEECCCCHHHCCCCHHCCCCHHHHHHHHHCCCEEECCCCCCEEHHHHHHHHHHCCEEE
GAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAKGMKIQHCKAHGALYNMAA
ECCCCCHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHH
IDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLRYANEVFADRAYNDDGTLVSR
HCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEHH
KLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNAKALEFVKKIKEN
HHCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCHHHHHHHHHHHHH
LKKEQIQICALENFI
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA