| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238536
Identifier: 57238536
GI number: 57238536
Start: 1587879
End: 1588580
Strand: Reverse
Name: 57238536
Synonym: CJE1686
Alternate gene names: NA
Gene position: 1588580-1587879 (Counterclockwise)
Preceding gene: 57238537
Following gene: 57238535
Centisome position: 89.35
GC content: 27.78
Gene sequence:
>702_bases ATGGATTTGGAAAAATTAAGATTAGCTAGAAGTCTTTATTATCAATGTCTAGGAGAGCTTTTTGTTTTTTCATTTTCTGA AGAAAGATTGTCAAAATTACAAGAGTATTTAAAGACAATGCAAGAATGTTTATTTGATGAAAATTTAAAATCAAATTTTG ATATCTTGCTTAAGCATTTAGATGATGAAAATTCTATACAAGCATTTTTTAAAGAATATGATTTGCTTTTTTTAAGTCTT AAAAATAGCATTCCAACGACTTTTTCTTACATAGAAGAAGGTTTTGAAAATTCAAATCCTTTACTTTGCGTGCGTCAAAT TTTAGTCAAAAGTAAAATAAGACGCAATGAAAAATTTTTTAAAGAAAGTGAAGATAGTGTTGGATTTTGTTTATTGTTGA TGAGTGAATTTTTAAGGCAAAATGAAGATGATTTAGCCAAAGAGCTTTTTGAAAAAGTGATCAATAAAAGCATTGATGAG TTTTTAGGCGATGTTTTCATGAATAAAAATGCGAATTTATATAAGGAAATTGCAAGTATTGCATCGGCTTTTATGGAATT TGAAAGACTTTGCTTTGAAGTGGAAAAACCTGCAAAAATAAATTCTAAAAAAGTGCAAAACGATCTATCGCGTTCAGAAT TTTTAAGAAGAGAAGCAAATAAACAAAGGAGGACTCGTGAAAAATCGCAGGGAATTTCTTAA
Upstream 100 bases:
>100_bases AAAATCGGCTTTAAAATGAATATTAGGTATATTTTGCATAATATTCATTCAAGCAAAATTTAAAGCTATTTTTGAAAATT TTGAATGCATGGGGGCTTTA
Downstream 100 bases:
>100_bases AAAATCTGCTTTTGCCTTAGGGGCTGCTGGAGTGCTTGGTAGCACGACTTTAGCTCTAGCTAAAGATGAAGAAAGAAAAG ATTTGGTTAAAGGTAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSL KNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDE FLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
Sequences:
>Translated_233_residues MDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSL KNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDE FLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS >Mature_233_residues MDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSL KNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDE FLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27573; Mature: 27573
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHL CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC DDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFF CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASI HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHL CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC DDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFF CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASI HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA